RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 Q6ZSR3 168 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 TMEM179BQ7Z7N9 219 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 FOXRED2Q8IWF2 684 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 ENTHD1Q8IYW4 607 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 FAM58AQ8N1B3 248 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 OR8U1Q8NH10 309 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 GIPC3Q8TF64 312 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 LEAP2Q969E1 77 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 RPEQ96AT9 228 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 ASB9Q96DX5 294 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 SEBOXQ9HB31 216 aaPredicted RBP7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 TAS2R3Q9NYW6 316 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 GLS2Q9UI32 602 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 R4GMQ9 66 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 SORL1Q92673 2214 aa7.92□□□□□ -1.14
NPLOC4-220ENST00000576940 A0A087X0M5 115 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 A0A1B0GX30 115 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 OOSP1A8MZH6 123 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 FGF16O43320 207 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 CIB2O75838 187 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 OR2H2O95918 312 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 IGKV1D-33P01593 117 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 IGKV1-33P01594 117 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 FRMD6-AS1P0C7T7 363 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 PRKACAP17612 351 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 CXCR4P61073 352 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 SCN1BQ07699 218 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 ZFP1Q6P2D0 407 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 ZNF322Q6U7Q0 402 aaPredicted RBP7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 OR11H1Q8NG94 326 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 OR4D6Q8NGJ1 314 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 OR9G1Q8NH87 305 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 ASB17Q8WXJ9 295 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 TOMM40LQ969M1 308 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 BORCS8Q96FH0 119 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 CITED4Q96RK1 184 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 THTPAQ9BU02 230 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 POMPQ9Y244 141 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 GSTK1Q9Y2Q3 226 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 SNX5Q9Y5X3 404 aa7.91□□□□□ -1.14
NPLOC4-220ENST00000576940 A0A1W2PPI3 338 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 ODAMA1E959 279 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 E2F6O75461 281 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 RPP14O95059 124 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 OSMP13725 252 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 CCL1P22362 96 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 PTGFRP43088 359 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 POU3F4P49335 361 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 GPR50Q13585 617 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 TRIM25Q14258 630 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 CXorf66Q5JRM2 361 aaPredicted RBP7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 BCDIN3DQ7Z5W3 292 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 RBMXL1Q96E39 390 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 COQ2Q96H96 371 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 HRASLS5Q96KN8 279 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 ZMAT4Q9H898 229 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 EXOSC4Q9NPD3 245 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 TVP23BQ9NYZ1 205 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 ACTR3BQ9P1U1 418 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 MRM2Q9UI43 246 aaKnown RBP7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 TMEM14AQ9Y6G1 99 aa7.9□□□□□ -1.14
NPLOC4-220ENST00000576940 TRBV2A0A0J9YWF9 115 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 FUOMA2VDF0 154 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 AQP12BA6NM10 295 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 DHRS7CA6NNS2 312 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 NCBP2LA6PVI3 153 aaKnown RBP7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 J3QR06 171 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 AP4M1O00189 453 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 CCRL2O00421 344 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 SH2D1BO14796 132 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 SYT7O43581 403 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 CGB3P0DN86 165 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 CGB7P0DN87 165 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 PRKACGP22612 351 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 GPR12P47775 334 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 CDC42P60953 191 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 MS4A2Q01362 244 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 LTC4SQ16873 150 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 KRBOX4Q5JUW0 171 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 C1orf146Q5VVC0 180 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 FAM53AQ6NSI3 398 aaPredicted RBP7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 AQP12AQ8IXF9 295 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 Q8IYB0 196 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 HS3ST5Q8IZT8 346 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 KIRREL1Q96J84 757 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 PPIL3Q9H2H8 161 aaKnown RBP7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 MAGIXQ9H6Y5 334 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 MOB1AQ9H8S9 216 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 PLEKHA1Q9HB21 404 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 HMG20AQ9NP66 347 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 PSG11Q9UQ72 335 aa7.89□□□□□ -1.15
NPLOC4-220ENST00000576940 IGHV3-72A0A0B4J1Y9 119 aa7.88□□□□□ -1.15
NPLOC4-220ENST00000576940 IGKV1-9A0A0C4DH69 117 aa7.88□□□□□ -1.15
NPLOC4-220ENST00000576940 IGKV1-12A0A0C4DH73 117 aa7.88□□□□□ -1.15
NPLOC4-220ENST00000576940 KBTBD11-OT1A0A1B0GTJ5 212 aa7.88□□□□□ -1.15
NPLOC4-220ENST00000576940 A0A1W2PPE3 182 aa7.88□□□□□ -1.15
NPLOC4-220ENST00000576940 TCRBV3S1A0A5B6 114 aa7.88□□□□□ -1.15
NPLOC4-220ENST00000576940 ZNF729A6NN14 1252 aaPredicted RBP7.88□□□□□ -1.15
NPLOC4-220ENST00000576940 CASQ2O14958 399 aaPredicted RBP7.88□□□□□ -1.15
NPLOC4-220ENST00000576940 GATBO75879 557 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms