RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 FAM173AQ9BQD7 235 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 ZNF703Q9H7S9 590 aaPredicted RBP7.69□□□□□ -1.18
NCBP3-204ENST00000574911 TMEM56-RWDD3S4R434 201 aa7.69□□□□□ -1.18
NCBP3-204ENST00000574911 CDS2O95674 445 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 NAPSAO96009 420 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 CELA3AP09093 270 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 NHLH2Q02577 135 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 CEACAM21Q3KPI0 293 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 MIDNQ504T8 468 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 DBX2Q6ZNG2 339 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 TMEM105Q8N8V8 129 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 SIGLEC12Q96PQ1 595 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 HS3ST6Q96QI5 342 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 TAAR9Q96RI9 348 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 USB1Q9BQ65 265 aaKnown RBP7.68□□□□□ -1.18
NCBP3-204ENST00000574911 PAPOLGQ9BWT3 736 aaKnown RBP7.68□□□□□ -1.18
NCBP3-204ENST00000574911 PARP12Q9H0J9 701 aaKnown RBP7.68□□□□□ -1.18
NCBP3-204ENST00000574911 TMEM222Q9H0R3 208 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 SMOC1Q9H4F8 434 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 A0A096LPE4 126 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 A0A1W2PPZ6 126 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 MEX3AA1L020 520 aaKnown RBP7.68□□□□□ -1.18
NCBP3-204ENST00000574911 NKX2-6A6NCS4 301 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 ZNF503-AS2A6NEH8 195 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 COLCA2A8K830 154 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 TSPAN15O95858 294 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 RAB5CP51148 216 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 FOXG1P55316 489 aaPredicted RBP7.68□□□□□ -1.18
NCBP3-204ENST00000574911 SRYQ05066 204 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 HMGN3Q15651 99 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 MEX3BQ6ZN04 569 aaKnown RBP7.68□□□□□ -1.18
NCBP3-204ENST00000574911 C5orf24Q7Z6I8 188 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 TBC1D26Q86UD7 250 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 C1orf210Q8IVY1 113 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 TUSC5Q8IXB3 177 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 ZDHHC23Q8IYP9 409 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 RXFP4Q8TDU9 374 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 SECTM1Q8WVN6 248 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 BOD1Q96IK1 185 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 AKR1E2Q96JD6 320 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 PRRG4Q9BZD6 226 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 LUZP4Q9P127 313 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 STRAPQ9Y3F4 350 aaKnown RBP7.68□□□□□ -1.18
NCBP3-204ENST00000574911 ZNF175Q9Y473 711 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 KPTNQ9Y664 436 aa7.68□□□□□ -1.18
NCBP3-204ENST00000574911 C5orf49A4QMS7 147 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 ZNHIT1O43257 154 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 NME2P1O60361 137 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 HLA-HP01893 362 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 CRYBA1P05813 215 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 CCL2P13500 99 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 HAAOP46952 286 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 RAB13P51153 203 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 GPM6AP51674 278 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 EWSR1Q01844 656 aaKnown RBP eCLIP7.67□□□□□ -1.18
NCBP3-204ENST00000574911 PEA15Q15121 130 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 MPV17LQ2QL34 196 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 C9orf135Q5VTT2 229 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 SELENOHQ8IZQ5 122 aaKnown RBP7.67□□□□□ -1.18
NCBP3-204ENST00000574911 DDA1Q9BW61 102 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 SH3BGRL3Q9H299 93 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 CALHM2Q9HA72 323 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 C19orf12Q9NSK7 152 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 MTCH1Q9NZJ7 389 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 ZNF732B4DXR9 585 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 C9orf172C9J069 976 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 TUSC2O75896 110 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 SYNGR4O95473 234 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 SCTP09683 121 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 CCNOP22674 350 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 PAX6P26367 422 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 CAMLGP49069 296 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 HOXA1P49639 335 aaPredicted RBP7.67□□□□□ -1.18
NCBP3-204ENST00000574911 ZXDAP98168 799 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 GNMTQ14749 295 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 GUK1Q16774 197 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 MRPL21Q7Z2W9 205 aaKnown RBP7.67□□□□□ -1.18
NCBP3-204ENST00000574911 APOBEC3DQ96AK3 386 aaPredicted RBP7.67□□□□□ -1.18
NCBP3-204ENST00000574911 HES7Q9BYE0 225 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 STRADBQ9C0K7 418 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 RNF122Q9H9V4 155 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 SMCO4Q9NRQ5 59 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 B4GALT7Q9UBV7 327 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 CFAP54Q96N23 3096 aa7.67□□□□□ -1.18
NCBP3-204ENST00000574911 FAM24AA6NFZ4 105 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 ZNF724A8MTY0 619 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 TNRC18O15417 2968 aaPredicted RBP7.66□□□□□ -1.18
NCBP3-204ENST00000574911 TK1P04183 234 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 FOLR2P14207 255 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 FHITP49789 147 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 HERPUD1Q15011 391 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 AVPI1Q5T686 147 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 CDCP2Q5VXM1 449 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 ZNF818PQ6ZRF7 136 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 MKXQ8IYA7 352 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 OR2C3Q8N628 320 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 KDF1Q8NAX2 398 aaPredicted RBP7.66□□□□□ -1.18
NCBP3-204ENST00000574911 OR5A2Q8NGI9 324 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 ABHD14BQ96IU4 210 aa7.66□□□□□ -1.18
NCBP3-204ENST00000574911 POM121L2Q96KW2 1035 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms