RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 C15orf61A6NNL5 157 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 ZNF705EA8MWA4 302 aaPredicted RBP2.65□□□□□ -1.99
NUP88-209ENST00000574855 EVPLLA8MZ36 301 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 ATP6V1G2-DDX39BF2Z307 99 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 F5H5K5 113 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 RFPL4AL1F8VTS6 287 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 H3BQF6 201 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 TNFRSF11BO00300 401 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 MFNGO00587 321 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 KPNA4O00629 521 aaPredicted RBP2.65□□□□□ -1.99
NUP88-209ENST00000574855 PLIN3O60664 434 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 CA11O75493 328 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 FOXH1O75593 365 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 S1PR2O95136 353 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 SLC2A10O95528 541 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 TTC4O95801 387 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 CLDN1O95832 211 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 HPRT1P00492 218 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 SEMG1P04279 462 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 HPNP05981 417 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 OR9G9P0C7N8 305 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 PGA4P0DJD7 388 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 PGA3P0DJD8 388 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 TAC1P20366 129 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 F2RP25116 425 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 HSPA9P38646 679 aaKnown RBP2.65□□□□□ -1.99
NUP88-209ENST00000574855 OPRL1P41146 370 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 GCLMP48507 274 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 SRP9P49458 86 aaKnown RBP2.65□□□□□ -1.99
NUP88-209ENST00000574855 RORCP51449 518 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 BIDP55957 195 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 RAB25P57735 213 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 PFN3P60673 137 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 ESRRGP62508 458 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 GNGT1P63211 74 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 EDDM3AQ14507 147 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 OR7A5Q15622 319 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 HIST3H3Q16695 136 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 PYCR3Q53H96 274 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 LINC00242Q5T6M2 205 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 C1orf195Q5TG92 126 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 XKRXQ6PP77 449 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 IDO2Q6ZQW0 420 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 FAM231DQ6ZW35 169 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 RAB43Q86YS6 212 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 CCDC71Q8IV32 467 aaPredicted RBP2.65□□□□□ -1.99
NUP88-209ENST00000574855 ZBTB8OSQ8IWT0 167 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 SLC34A3Q8N130 599 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 GAPTQ8N292 157 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 SMIM20Q8N5G0 67 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 SUMF1Q8NBK3 374 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 ZNRF1Q8ND25 227 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 OR6T1Q8NGN1 323 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 OR10G8Q8NGN5 311 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 RFESDQ8TAC1 157 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 OR51E1Q8TCB6 317 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 EEF1AKMT1Q8WVE0 214 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 ASB17Q8WXJ9 295 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 ASB13Q8WXK3 278 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 C11orf40Q8WZ69 217 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 MAGOHBQ96A72 148 aaKnown RBP2.65□□□□□ -1.99
NUP88-209ENST00000574855 CLDN23Q96B33 292 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 DCPSQ96C86 337 aaKnown RBP2.65□□□□□ -1.99
NUP88-209ENST00000574855 ZNF300Q96RE9 604 aaPredicted RBP2.65□□□□□ -1.99
NUP88-209ENST00000574855 SIGMAR1Q99720 223 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 KCTD14Q9BQ13 255 aaPredicted RBP2.65□□□□□ -1.99
NUP88-209ENST00000574855 TMED9Q9BVK6 235 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 ACTR6Q9GZN1 396 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 THAP10Q9P2Z0 257 aaPredicted RBP2.65□□□□□ -1.99
NUP88-209ENST00000574855 SLC2A6Q9UGQ3 507 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 MLXQ9UH92 298 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 CIDEBQ9UHD4 219 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 MOKQ9UQ07 419 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 TRAPPC4Q9Y296 219 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 MOB4Q9Y3A3 225 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 PRELID3BQ9Y3B1 194 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 UFC1Q9Y3C8 167 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 CHD5Q8TDI0 1954 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 NRCAMQ92823 1304 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 LTBP1Q14766 1721 aa2.65□□□□□ -1.99
NUP88-209ENST00000574855 FOCADQ5VW36 1801 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 IGKV1D-8A0A087WSZ0 117 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 TRBV5-4A0A0C4DH59 114 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 A0A0G2JMP0 313 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 A0A1B0GV90 55 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 A6NDN8 102 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 METTL15A6NJ78 407 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 PPP5D1E7EU14 171 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 F8W036 122 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 GPR31O00270 319 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 TNFSF12O43508 249 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 CHP2O43745 196 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 CST8O60676 142 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 SUPT3HO75486 399 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 GPR75O95800 540 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 CCNE2O96020 404 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 IFNA1P01562 189 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 CD55P08174 381 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 RBMY1CP0DJD4 496 aa2.64□□□□□ -1.99
NUP88-209ENST00000574855 PGA5P0DJD9 388 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms