RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 C17orf50Q8WW18 174 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 BOD1Q96IK1 185 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 PRRX2Q99811 253 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 MICU1Q9BPX6 476 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 PLEKHA2Q9HB19 425 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 LHX6Q9UPM6 363 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 PTPRBP23467 1997 aa13.94□□□□□ -0.18
POLR2A-201ENST00000572844 ZNF318Q5VUA4 2279 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 ZNHIT1O43257 154 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 SYNGR1O43759 233 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 SCO1O75880 301 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 DIRAS3O95661 229 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 KCNJ3P48549 501 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 HAGHLQ6PII5 290 aaPredicted RBP13.93□□□□□ -0.18
POLR2A-201ENST00000572844 VASH2Q86V25 355 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 LDLRAD3Q86YD5 345 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 FDCSPQ8NFU4 85 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 GLYATL2Q8WU03 294 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 HS3ST6Q96QI5 342 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 OR51I2Q9H344 312 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 TAS2R3Q9NYW6 316 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 FBXO9Q9UK97 447 aaPredicted RBP13.93□□□□□ -0.18
POLR2A-201ENST00000572844 ESPL1Q14674 2120 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 DOCK7Q96N67 2140 aa13.93□□□□□ -0.18
POLR2A-201ENST00000572844 SPAARA0A1B0GVQ0 90 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 TRDCB7Z8K6 153 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 LGALS8O00214 317 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 AQP7O14520 342 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 TK1P04183 234 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 HOXD4P09016 255 aaPredicted RBP13.92□□□□□ -0.18
POLR2A-201ENST00000572844 CCL11P51671 97 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 PHLDA2Q53GA4 152 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 IGSF11Q5DX21 431 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 EIF5AL1Q6IS14 154 aaKnown RBP13.92□□□□□ -0.18
POLR2A-201ENST00000572844 MARC2Q969Z3 335 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 TMA7Q9Y2S6 64 aaKnown RBP13.92□□□□□ -0.18
POLR2A-201ENST00000572844 ATP23Q9Y6H3 246 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 TRAV17A0A0B4J275 112 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 J3QT63 122 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 TUSC2O75896 110 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 ZNF205O95201 554 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 GAPDHP04406 335 aaKnown RBP13.92□□□□□ -0.18
POLR2A-201ENST00000572844 PRKACAP17612 351 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 IGHV1-2P23083 117 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 RPL12P30050 165 aaKnown RBP13.92□□□□□ -0.18
POLR2A-201ENST00000572844 PMP22Q01453 160 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 FAM58AQ8N1B3 248 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 BATF2Q8N1L9 274 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 TMED3Q9Y3Q3 217 aa13.92□□□□□ -0.18
POLR2A-201ENST00000572844 E5RGE8 158 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 TEX46H3BTG2 121 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 K7EPK0 472 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 MPPED1O15442 326 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 LILRA1O75019 489 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 FAM157CP0CG43 387 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 DUSP1P28562 367 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 SP6Q3SY56 376 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 FAM76BQ5HYJ3 339 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 OR2T2Q6IF00 324 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 ZNF880Q6PDB4 577 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 INO80CQ6PI98 192 aaPredicted RBP13.91□□□□□ -0.18
POLR2A-201ENST00000572844 FAM214BQ7L5A3 538 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 FAM71E2Q8N5Q1 922 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 SUMF2Q8NBJ7 301 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 OR5T2Q8NGG2 359 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 RTL8AQ9BWD3 113 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 PCDHB10Q9UN67 800 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 NSG2Q9Y328 171 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 SMPD2O60906 423 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 GNRHRP30968 328 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 UBE2NP61088 152 aaKnown RBP13.91□□□□□ -0.18
POLR2A-201ENST00000572844 Q8IYB0 196 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 OR1S2Q8NGQ3 325 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 SAT2Q96F10 170 aaPredicted RBP13.91□□□□□ -0.18
POLR2A-201ENST00000572844 CDH20Q9HBT6 801 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 IL36RNQ9UBH0 155 aa13.91□□□□□ -0.18
POLR2A-201ENST00000572844 C3orf85A0A1B0GTC6 90 aa13.9□□□□□ -0.18
POLR2A-201ENST00000572844 LRP5LA4QPB2 252 aa13.9□□□□□ -0.18
POLR2A-201ENST00000572844 SLC34A2O95436 690 aa13.9□□□□□ -0.18
POLR2A-201ENST00000572844 MBPP02686 304 aaPredicted RBP13.9□□□□□ -0.18
POLR2A-201ENST00000572844 Q6ZT83 130 aa13.9□□□□□ -0.18
POLR2A-201ENST00000572844 LYZL2Q7Z4W2 148 aa13.9□□□□□ -0.18
POLR2A-201ENST00000572844 OR11L1Q8NGX0 322 aa13.9□□□□□ -0.18
POLR2A-201ENST00000572844 MRPL30Q8TCC3 161 aaKnown RBP13.9□□□□□ -0.18
POLR2A-201ENST00000572844 TMED6Q8WW62 240 aa13.9□□□□□ -0.18
POLR2A-201ENST00000572844 AMDHD2Q9Y303 409 aa13.9□□□□□ -0.18
POLR2A-201ENST00000572844 GPR31O00270 319 aa13.89□□□□□ -0.19
POLR2A-201ENST00000572844 SCTP09683 121 aa13.89□□□□□ -0.19
POLR2A-201ENST00000572844 RAC2P15153 192 aa13.89□□□□□ -0.19
POLR2A-201ENST00000572844 CA6P23280 308 aa13.89□□□□□ -0.19
POLR2A-201ENST00000572844 PPP1CBP62140 327 aa13.89□□□□□ -0.19
POLR2A-201ENST00000572844 GABRA6Q16445 453 aa13.89□□□□□ -0.19
POLR2A-201ENST00000572844 C1orf162Q8NEQ5 155 aaPredicted RBP13.89□□□□□ -0.19
POLR2A-201ENST00000572844 TMEM56Q96MV1 263 aa13.89□□□□□ -0.19
POLR2A-201ENST00000572844 TMEM222Q9H0R3 208 aa13.89□□□□□ -0.19
POLR2A-201ENST00000572844 TREM2Q9NZC2 230 aa13.89□□□□□ -0.19
POLR2A-201ENST00000572844 TMEM56-RWDD3S4R434 201 aa13.89□□□□□ -0.19
POLR2A-201ENST00000572844 TRAV24A0A0B4J272 114 aa13.89□□□□□ -0.19
POLR2A-201ENST00000572844 DUXBA0A1W2PPF3 345 aa13.89□□□□□ -0.19
POLR2A-201ENST00000572844 PHF1O43189 567 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms