RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 J3QR06 171 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 MPZL2O60487 215 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 ENTPD6O75354 484 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 CSN2P05814 226 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 OR5H8P0DN80 308 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 GP9P14770 177 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 VDAC1P21796 283 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 POU3F4P49335 361 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 ZNF616Q08AN1 781 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 APOFQ13790 326 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 GINS1Q14691 196 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 UBE2V2Q15819 145 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 C16orf89Q6UX73 402 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 OR10G2Q8NGC3 310 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 OR1N2Q8NGR9 330 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 NIPSNAP1Q9BPW8 284 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 OR6C3Q9NZP0 311 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 R4GMQ9 66 aa8.84□□□□□ -0.99
CHMP6-202ENST00000571457 TNCP24821 2201 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 KBTBD11-OT1A0A1B0GTJ5 212 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 SAP30O75446 220 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 SRSF10O75494 262 aaKnown RBP8.83□□□□□ -1
CHMP6-202ENST00000571457 OR2H2O95918 312 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 MRPL3P09001 348 aaKnown RBP8.83□□□□□ -1
CHMP6-202ENST00000571457 SPNP16150 400 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 BCL3P20749 454 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 CCL1P22362 96 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 SLC2A5P22732 501 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 PSMB8P28062 276 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 PRDX6P30041 224 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 NPBWR2P48146 333 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 RBP2P50120 134 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 ATP1B3P54709 279 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 SNU13P55769 128 aaKnown RBP8.83□□□□□ -1
CHMP6-202ENST00000571457 RUNX1Q01196 453 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 BNIP1Q12981 228 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 EBI3Q14213 229 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 GK3PQ14409 553 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 KRBOX4Q5JUW0 171 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 OR2T5Q6IEZ7 315 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 ZNF322Q6U7Q0 402 aaPredicted RBP8.83□□□□□ -1
CHMP6-202ENST00000571457 FAM71E2Q8N5Q1 922 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 ZNF565Q8N9K5 539 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 CHST4Q8NCG5 386 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 CCDC54Q8NEL0 328 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 BBS1Q8NFJ9 593 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 OR6Q1Q8NGQ2 317 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 OR2T29Q8NH02 315 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 IL17DQ8TAD2 202 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 KIRREL1Q96J84 757 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 UBE2E2Q96LR5 201 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 FEVQ99581 238 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 TTTY10Q9BZA0 68 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 CHST5Q9GZS9 411 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 GHITMQ9H3K2 345 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 GSTK1Q9Y2Q3 226 aa8.83□□□□□ -1
CHMP6-202ENST00000571457 PRR32B1ATL7 298 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 OVOL1O14753 267 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 SYT7O43581 403 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 IFNA6P05013 189 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 CFHR3Q02985 330 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 SPATS1Q496A3 300 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 TMEM65Q6PI78 240 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 HDXQ7Z353 690 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 DNAAF1Q8NEP3 725 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 OR10X1Q8NGY0 326 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 OR2T10Q8NGZ9 312 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 GIPC3Q8TF64 312 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 C10orf35Q96D05 121 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 EAF1Q96JC9 268 aaPredicted RBP8.82□□□□□ -1
CHMP6-202ENST00000571457 CNN2Q99439 309 aaKnown RBP8.82□□□□□ -1
CHMP6-202ENST00000571457 MNTQ99583 582 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 RASL11BQ9BPW5 248 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 SPATA25Q9BR10 227 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 CHCHD6Q9BRQ6 235 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 ADI1Q9BV57 179 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 MAGIXQ9H6Y5 334 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 HMG20AQ9NP66 347 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 COPS3Q9UNS2 423 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 VSIG4Q9Y279 399 aa8.82□□□□□ -1
CHMP6-202ENST00000571457 PLECQ15149 4684 aaKnown RBP8.81□□□□□ -1
CHMP6-202ENST00000571457 TRIM64CA6NLI5 447 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 GAPDHP04406 335 aaKnown RBP8.81□□□□□ -1
CHMP6-202ENST00000571457 CALCBP10092 127 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 ZNF44P15621 663 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 MYF6P23409 242 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 MTCP1P56278 107 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 CXCR4P61073 352 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 ISL1P61371 349 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 GABPB1Q06547 395 aaPredicted RBP8.81□□□□□ -1
CHMP6-202ENST00000571457 SCN1BQ07699 218 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 C17orf58Q2M2W7 97 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 UTF1Q5T230 341 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 CYP2R1Q6VVX0 501 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 SLC16A12Q6ZSM3 486 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 MOB3BQ86TA1 216 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 LYPD6Q86Y78 171 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 IZUMO1Q8IYV9 350 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 PGAM4Q8N0Y7 254 aa8.81□□□□□ -1
CHMP6-202ENST00000571457 OR8H1Q8NGG4 311 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms