RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SERPINA12Q8IW75 414 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 SAXO1Q8IYX7 474 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 DYNAPQ8N1N2 210 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 KLHDC1Q8N7A1 406 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 ZNF555Q8NEP9 628 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 OR52I1Q8NGK6 324 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 NDNFQ8TB73 568 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 PIFOQ8TCI5 191 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 STMN2Q93045 179 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 PDCD1LG2Q9BQ51 273 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 RSRP1Q9BUV0 290 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 CLEC7AQ9BXN2 247 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 TMEM133Q9H2Q1 129 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 SMPD3Q9NY59 655 aaPredicted RBP9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 UBE2J1Q9Y385 318 aaPredicted RBP9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 MINOS1-NBL1R4GNA1 71 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 CMYA5Q8N3K9 4069 aa9.99□□□□□ -0.81
CTDNEP1-205ENST00000570828 E9PI62 339 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 CSF1P09603 554 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 TMEM225BP0DP42 221 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 RAB13P51153 203 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 SLC34A1Q06495 639 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 SCN1BQ07699 218 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 KISS1Q15726 138 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 KLHL22Q53GT1 634 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 SAMD5Q5TGI4 173 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 PRAMEF5Q5TYX0 476 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 LPCAT4Q643R3 524 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 TMEM219Q86XT9 240 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 PARP16Q8N5Y8 322 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 CHST4Q8NCG5 386 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 FAM110DQ8TAY7 271 aaPredicted RBP9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 APH1BQ8WW43 257 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 EAF1Q96JC9 268 aaPredicted RBP9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 RDH12Q96NR8 316 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 FOXJ3Q9UPW0 622 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 HILPDAQ9Y5L2 63 aa9.98□□□□□ -0.81
CTDNEP1-205ENST00000570828 ODAMA1E959 279 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 A6NDX4 124 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 MAGEB3O15480 346 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 ALX3O95076 343 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 CD2P06729 351 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 VSIG10L2P0DP72 767 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 RAB3AP20336 220 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 DYNLT3P51808 116 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 ZP1P60852 638 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 IL18R1Q13478 541 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 PDLIM3Q53GG5 364 aaPredicted RBP9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 KRBOX4Q5JUW0 171 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 LDLRAD2Q5SZI1 272 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 ZNF691Q5VV52 312 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 OR52W1Q6IF63 320 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 RNF144BQ7Z419 303 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 C11orf44Q8N8P7 122 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 GPER1Q99527 375 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 ZNF649Q9BS31 505 aa9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 MRPS18AQ9NVS2 196 aaKnown RBP9.97□□□□□ -0.81
CTDNEP1-205ENST00000570828 A0A0G2JK05 382 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 IRGMA1A4Y4 181 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 H3BUI4 141 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 DEGS1O15121 323 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 WBP4O75554 376 aaKnown RBP9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 SCGB1D2O95969 90 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 CSN2P05814 226 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 LIMS3P0CW19 117 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 LIMS4P0CW20 117 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 MYL12AP19105 171 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 CDK2P24941 298 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 LMO1P25800 156 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 DCKP27707 260 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 HTR1DP28221 377 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 PTGFRP43088 359 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 GLIPR1P48060 266 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 SOX2P48431 317 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 MTNR1BP49286 362 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 ARHGDIBP52566 201 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 TNP2Q05952 138 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 AESQ08117 197 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 ATXN7L3Q14CW9 347 aaPredicted RBP9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 SMN1Q16637 294 aaKnown RBP9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 Q6P435 159 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 HEPN1Q6WQI6 88 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 TMPRSS11AQ6ZMR5 421 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 RTN4RL2Q86UN3 420 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 ABHD12Q8N2K0 398 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 OR4P4Q8NGL7 312 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 SVIPQ8NHG7 77 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 ZNF596Q8TC21 504 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 GPR148Q8TDV2 347 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 TNFAIP8L1Q8WVP5 186 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 ANAPC16Q96DE5 110 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 JAM3Q9BX67 310 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 FAM192AQ9GZU8 254 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 ZNF702PQ9H963 129 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 FGF20Q9NP95 211 aaPredicted RBP9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 ING3Q9NXR8 418 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 TAS2R3Q9NYW6 316 aa9.96□□□□□ -0.82
CTDNEP1-205ENST00000570828 FAM172BPA6NC97 362 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 H0YJX3 145 aa9.95□□□□□ -0.82
CTDNEP1-205ENST00000570828 SLC33A1O00400 549 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms