RNA–Protein interactions for RNA: ENST00000569095.1

CDH11-215, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 436 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-215ENST00000569095 UBA3Q8TBC4 463 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 BAALCQ8WXS3 180 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 TMEM230Q96A57 120 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 RPEQ96AT9 228 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 PDXPQ96GD0 296 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 ZNF396Q96N95 335 aaPredicted RBP2.01□□□□□ -2.09
CDH11-215ENST00000569095 COL21A1Q96P44 957 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 MICU1Q9BPX6 476 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 KCNS3Q9BQ31 491 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 CHID1Q9BWS9 393 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 HINT2Q9BX68 163 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 MAP1LC3CQ9BXW4 147 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 ULBP3Q9BZM4 244 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 TCEAL2Q9H3H9 227 aaPredicted RBP2.01□□□□□ -2.09
CDH11-215ENST00000569095 RDH14Q9HBH5 336 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 NOX3Q9HBY0 568 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 MRM3Q9HC36 420 aaKnown RBP2.01□□□□□ -2.09
CDH11-215ENST00000569095 SLC40A1Q9NP59 571 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 TREM1Q9NP99 234 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 ZNF629Q9UEG4 869 aaPredicted RBP2.01□□□□□ -2.09
CDH11-215ENST00000569095 ST3GAL6Q9Y274 331 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 FADS3Q9Y5Q0 445 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 SCN3AQ9NY46 2000 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 ARID1AO14497 2285 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 ZNF407Q9C0G0 2248 aa2.01□□□□□ -2.09
CDH11-215ENST00000569095 NIPBLQ6KC79 2804 aaeCLIP2□□□□□ -2.09
CDH11-215ENST00000569095 DSCAMO60469 2012 aa2□□□□□ -2.09
CDH11-215ENST00000569095 MN1Q10571 1320 aaPredicted RBP2□□□□□ -2.09
CDH11-215ENST00000569095 NCKAP5O14513 1909 aa2□□□□□ -2.09
CDH11-215ENST00000569095 IGHV5-10-1A0A0J9YXX1 117 aa2□□□□□ -2.09
CDH11-215ENST00000569095 RAB19A4D1S5 217 aa2□□□□□ -2.09
CDH11-215ENST00000569095 ARGFXA6NJG6 315 aa2□□□□□ -2.09
CDH11-215ENST00000569095 C21orf140B9A014 251 aa2□□□□□ -2.09
CDH11-215ENST00000569095 CETN3O15182 167 aa2□□□□□ -2.09
CDH11-215ENST00000569095 SLC25A14O95258 325 aaPredicted RBP2□□□□□ -2.09
CDH11-215ENST00000569095 RAB3DO95716 219 aa2□□□□□ -2.09
CDH11-215ENST00000569095 CCL4P13236 92 aa2□□□□□ -2.09
CDH11-215ENST00000569095 COX6B1P14854 86 aa2□□□□□ -2.09
CDH11-215ENST00000569095 ZNF823P16415 610 aa2□□□□□ -2.09
CDH11-215ENST00000569095 CSNK2A2P19784 350 aaPredicted RBP2□□□□□ -2.09
CDH11-215ENST00000569095 BGNP21810 368 aa2□□□□□ -2.09
CDH11-215ENST00000569095 CEACAM6P40199 344 aa2□□□□□ -2.09
CDH11-215ENST00000569095 ACTR1BP42025 376 aa2□□□□□ -2.09
CDH11-215ENST00000569095 ZNF121P58317 390 aaPredicted RBP2□□□□□ -2.09
CDH11-215ENST00000569095 RHOAP61586 193 aa2□□□□□ -2.09
CDH11-215ENST00000569095 RAP1AP62834 184 aa2□□□□□ -2.09
CDH11-215ENST00000569095 ERCC8Q13216 396 aa2□□□□□ -2.09
CDH11-215ENST00000569095 XRCC4Q13426 336 aa2□□□□□ -2.09
CDH11-215ENST00000569095 EIF4EBP1Q13541 118 aaPredicted RBP2□□□□□ -2.09
CDH11-215ENST00000569095 PON3Q15166 354 aa2□□□□□ -2.09
CDH11-215ENST00000569095 PSG3Q16557 428 aa2□□□□□ -2.09
CDH11-215ENST00000569095 POU2AF1Q16633 256 aa2□□□□□ -2.09
CDH11-215ENST00000569095 BRMS1LQ5PSV4 323 aa2□□□□□ -2.09
CDH11-215ENST00000569095 NANOGP8Q6NSW7 305 aa2□□□□□ -2.09
CDH11-215ENST00000569095 RWDD4Q6NW29 188 aaKnown RBP2□□□□□ -2.09
CDH11-215ENST00000569095 TEX43Q6ZNM6 134 aa2□□□□□ -2.09
CDH11-215ENST00000569095 FAM92BQ6ZTR7 304 aa2□□□□□ -2.09
CDH11-215ENST00000569095 NCCRP1Q6ZVX7 275 aaPredicted RBP2□□□□□ -2.09
CDH11-215ENST00000569095 COMTD1Q86VU5 262 aa2□□□□□ -2.09
CDH11-215ENST00000569095 SYS1Q8N2H4 156 aa2□□□□□ -2.09
CDH11-215ENST00000569095 NOXO1Q8NFA2 376 aa2□□□□□ -2.09
CDH11-215ENST00000569095 OR52E2Q8NGJ4 325 aa2□□□□□ -2.09
CDH11-215ENST00000569095 OR6K2Q8NGY2 324 aa2□□□□□ -2.09
CDH11-215ENST00000569095 OR5W2Q8NH69 310 aa2□□□□□ -2.09
CDH11-215ENST00000569095 APH1BQ8WW43 257 aa2□□□□□ -2.09
CDH11-215ENST00000569095 TFGQ92734 400 aaPredicted RBP2□□□□□ -2.09
CDH11-215ENST00000569095 LRRC58Q96CX6 371 aa2□□□□□ -2.09
CDH11-215ENST00000569095 SEH1LQ96EE3 360 aa2□□□□□ -2.09
CDH11-215ENST00000569095 RNF170Q96K19 258 aa2□□□□□ -2.09
CDH11-215ENST00000569095 KLF6Q99612 283 aaPredicted RBP2□□□□□ -2.09
CDH11-215ENST00000569095 GPR21Q99679 349 aa2□□□□□ -2.09
CDH11-215ENST00000569095 CTRCQ99895 268 aa2□□□□□ -2.09
CDH11-215ENST00000569095 NAA50Q9GZZ1 169 aaKnown RBP2□□□□□ -2.09
CDH11-215ENST00000569095 OR52A5Q9H2C5 316 aa2□□□□□ -2.09
CDH11-215ENST00000569095 ZSCAN16Q9H4T2 348 aaPredicted RBP2□□□□□ -2.09
CDH11-215ENST00000569095 ARMC7Q9H6L4 198 aa2□□□□□ -2.09
CDH11-215ENST00000569095 MRPL40Q9NQ50 206 aaKnown RBP2□□□□□ -2.09
CDH11-215ENST00000569095 NECAP2Q9NVZ3 263 aa2□□□□□ -2.09
CDH11-215ENST00000569095 STMN3Q9NZ72 180 aa2□□□□□ -2.09
CDH11-215ENST00000569095 CTSFQ9UBX1 484 aa2□□□□□ -2.09
CDH11-215ENST00000569095 ZNF229Q9UJW7 825 aa2□□□□□ -2.09
CDH11-215ENST00000569095 ZNF222Q9UK12 451 aa2□□□□□ -2.09
CDH11-215ENST00000569095 MRPS18BQ9Y676 258 aaKnown RBP2□□□□□ -2.09
CDH11-215ENST00000569095 MAP1AP78559 2803 aaPredicted RBP2□□□□□ -2.09
CDH11-215ENST00000569095 ACANP16112 2415 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 CSPG4Q6UVK1 2322 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 IGHV5-51A0A0C4DH38 117 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 IGHV3-66A0A0C4DH42 116 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 A0A0D9SEW6 157 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 CXorf51AA0A1B0GTR3 108 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 IQCF5A8MTL0 148 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 GABRPO00591 440 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 NME4O00746 187 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 PRMT5O14744 637 aaPredicted RBP1.99□□□□□ -2.09
CDH11-215ENST00000569095 YEATS4O95619 227 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 IGLV3-25P01717 112 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 CATP04040 527 aaKnown RBP1.99□□□□□ -2.09
CDH11-215ENST00000569095 UQCRHP07919 91 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 GNAO1P09471 354 aa1.99□□□□□ -2.09
CDH11-215ENST00000569095 TLX1NBP0CAT3 122 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms