RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 USP43Q70EL4 1123 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 GDPD3Q7L5L3 318 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 NDNFQ8TB73 568 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 RAB40AQ8WXH6 277 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 SLC25A46Q96AG3 418 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 DCTN5Q9BTE1 182 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 URM1Q9BTM9 101 aaKnown RBP13.86□□□□□ -0.19
COMMD4-224ENST00000568877 TM2D1Q9BX74 207 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 LPAR5Q9H1C0 372 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 RPUSD1Q9UJJ7 312 aaKnown RBP13.86□□□□□ -0.19
COMMD4-224ENST00000568877 RAB22AQ9UL26 194 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 CEPT1Q9Y6K0 416 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 HIVEP1P15822 2718 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 YLPM1P49750 1951 aaKnown RBP13.85□□□□□ -0.19
COMMD4-224ENST00000568877 IGHV2-70DA0A0C4DH43 119 aa13.85□□□□□ -0.19
COMMD4-224ENST00000568877 H3BUI4 141 aa13.85□□□□□ -0.19
COMMD4-224ENST00000568877 MGST3O14880 152 aa13.85□□□□□ -0.19
COMMD4-224ENST00000568877 NOL3O60936 208 aaKnown RBP13.85□□□□□ -0.19
COMMD4-224ENST00000568877 PLA2G7Q13093 441 aa13.85□□□□□ -0.19
COMMD4-224ENST00000568877 BLMHQ13867 455 aa13.85□□□□□ -0.19
COMMD4-224ENST00000568877 PAN3Q58A45 887 aaKnown RBP13.85□□□□□ -0.19
COMMD4-224ENST00000568877 ATAD3CQ5T2N8 411 aa13.85□□□□□ -0.19
COMMD4-224ENST00000568877 SUMF2Q8NBJ7 301 aa13.85□□□□□ -0.19
COMMD4-224ENST00000568877 DACT3Q96B18 629 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-224ENST00000568877 NUDT16L1Q9BRJ7 211 aaKnown RBP13.85□□□□□ -0.19
COMMD4-224ENST00000568877 DPCDQ9BVM2 203 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-224ENST00000568877 DCSTAMPQ9H295 470 aa13.85□□□□□ -0.19
COMMD4-224ENST00000568877 PPA2Q9H2U2 334 aa13.85□□□□□ -0.19
COMMD4-224ENST00000568877 GSX1Q9H4S2 264 aaPredicted RBP13.85□□□□□ -0.19
COMMD4-224ENST00000568877 SPACA1Q9HBV2 294 aa13.85□□□□□ -0.19
COMMD4-224ENST00000568877 TRBV23-1A0A0A0MS06 115 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 A0A0G2JMP0 313 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 A0A0X1KG70 313 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 KIR2DS1A0A191URI9 304 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 HSPB6O14558 160 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 ENSAO43768 121 aaKnown RBP13.84□□□□□ -0.19
COMMD4-224ENST00000568877 CSN2P05814 226 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 SNRPBP14678 240 aaKnown RBP13.84□□□□□ -0.19
COMMD4-224ENST00000568877 RAB6AP20340 208 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 GATA3P23771 443 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 EDDM3AQ14507 147 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 DCAF12L2Q5VW00 463 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 BPIFB2Q8N4F0 458 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 FAM89BQ8N5H3 189 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 LY6G5BQ8NDX9 201 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 OR4M2Q8NGB6 313 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 C8orf46Q8TAG6 207 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 PTX4Q96A99 478 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 ISOC1Q96CN7 298 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 NICN1Q9BSH3 213 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 MRI1Q9BV20 369 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 YAE1D1Q9NRH1 226 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 RCC2Q9P258 522 aaKnown RBP13.84□□□□□ -0.19
COMMD4-224ENST00000568877 KCNS2Q9ULS6 477 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 INSIG2Q9Y5U4 225 aa13.84□□□□□ -0.19
COMMD4-224ENST00000568877 A0A0A6YYD4 124 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 PAHP00439 452 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 LIPFP07098 398 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 PPIAL4GP0DN37 164 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 FUT3P21217 361 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 ERP29P30040 261 aaKnown RBP13.83□□□□□ -0.2
COMMD4-224ENST00000568877 KCNJ3P48549 501 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 RORCP51449 518 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 EFNB2P52799 333 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 EDDM3BP56851 147 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 SCAND1P57086 179 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 RPL31P62899 125 aaKnown RBP13.83□□□□□ -0.2
COMMD4-224ENST00000568877 SPCS2Q15005 226 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 FAM189A2Q15884 450 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 SIGIRRQ6IA17 410 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 RAB12Q6IQ22 244 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 FAHD2BQ6P2I3 314 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-224ENST00000568877 BRICD5Q6PL45 260 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 BTNL3Q6UXE8 466 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 OR4M1Q8NGD0 313 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 LGALS14Q8TCE9 139 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 FAHD2AQ96GK7 314 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 BARHL1Q9BZE3 327 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 C19orf12Q9NSK7 152 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 ABRACLQ9P1F3 81 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 PEX16Q9Y5Y5 336 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 ZANQ9Y493 2812 aa13.83□□□□□ -0.2
COMMD4-224ENST00000568877 A0A1W2PQ09 198 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 FUOMA2VDF0 154 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 CCDC160A6NGH7 325 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 A8MV72 311 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-224ENST00000568877 MCRIP1C9JLW8 97 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 H3BMQ9 156 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 J3QLI3 93 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 PDCD6O75340 191 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 GLAP06280 429 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 BLVRBP30043 206 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-224ENST00000568877 P2RX3P56373 397 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 PAX8Q06710 450 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 AESQ08117 197 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 ATXN7L3Q14CW9 347 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-224ENST00000568877 FAM185AQ8N0U4 392 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 DMRTB1Q96MA1 342 aa13.82□□□□□ -0.2
COMMD4-224ENST00000568877 RBM38Q9H0Z9 239 aaKnown RBP13.82□□□□□ -0.2
COMMD4-224ENST00000568877 ETV7Q9Y603 341 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms