RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 ZMYND11Q15326 602 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 TAF9Q16594 264 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 Q5PR19 223 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 ELP2Q6IA86 826 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 FIP1L1Q6UN15 594 aaKnown RBP6.45□□□□□ -1.38
SMG1-214ENST00000568038 OR2W3Q7Z3T1 314 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 LRRC28Q86X40 367 aaPredicted RBP6.45□□□□□ -1.38
SMG1-214ENST00000568038 FAM90A1Q86YD7 464 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 BCL6BQ8N143 479 aaPredicted RBP6.45□□□□□ -1.38
SMG1-214ENST00000568038 OR51T1Q8NGJ9 327 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 C10orf105Q8TEF2 133 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 GCDHQ92947 438 aaPredicted RBP6.45□□□□□ -1.38
SMG1-214ENST00000568038 TMEM246Q9BRR3 403 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 PIMREGQ9BSJ6 248 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 TMEM59Q9BXS4 323 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 BPESC1Q9GZL8 116 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 CST11Q9H112 138 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 RHOFQ9HBH0 211 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 TMEM165Q9HC07 324 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 HES4Q9HCC6 221 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 ZNF581Q9P0T4 197 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 ABRACLQ9P1F3 81 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 COMMD3Q9UBI1 195 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 ITGB1BP2Q9UKP3 347 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 RAB22AQ9UL26 194 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 ST3GAL6Q9Y274 331 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 TENM4Q6N022 2769 aa6.45□□□□□ -1.38
SMG1-214ENST00000568038 SPG11Q96JI7 2443 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 IGKV1D-17A0A075B6S4 117 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 IGHV4-30-2A0A087WSY4 118 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 SIRPB1O00241 398 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 SH2D1BO14796 132 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 GEMIN2O14893 280 aaKnown RBP6.44□□□□□ -1.38
SMG1-214ENST00000568038 DEGS1O15121 323 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 LDLRAD4O15165 306 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 ADAM20O43506 726 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 OR7C1O76099 320 aaPredicted RBP6.44□□□□□ -1.38
SMG1-214ENST00000568038 HAND1O96004 215 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 ZNF44P15621 663 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 MUC1P15941 1255 aaPredicted RBP6.44□□□□□ -1.38
SMG1-214ENST00000568038 GABRR1P24046 479 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 GIFP27352 417 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 PRDX2P32119 198 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 MDH2P40926 338 aaKnown RBP6.44□□□□□ -1.38
SMG1-214ENST00000568038 NR4A2P43354 598 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 BMXP51813 675 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 ART1P52961 327 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 DSCR9P59020 149 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 RPS27AP62979 156 aaKnown RBP6.44□□□□□ -1.38
SMG1-214ENST00000568038 CNPY1Q3B7I2 92 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 ZNF404Q494X3 552 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 ATAD3CQ5T2N8 411 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 TEX36Q5VZQ5 186 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 MZT2AQ6P582 158 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 LYPD2Q6UXB3 125 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 CD177Q8N6Q3 437 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 SAMD12Q8N8I0 201 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 Q8NFD4 153 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 MCFD2Q8NI22 146 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 ANGPTL6Q8NI99 470 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 ACOT12Q8WYK0 555 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 AP3S1Q92572 193 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 CCL13Q99616 98 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 NICN1Q9BSH3 213 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 URM1Q9BTM9 101 aaKnown RBP6.44□□□□□ -1.38
SMG1-214ENST00000568038 MRI1Q9BV20 369 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 SLIRPQ9GZT3 109 aaKnown RBP6.44□□□□□ -1.38
SMG1-214ENST00000568038 C6orf62Q9GZU0 229 aaPredicted RBP6.44□□□□□ -1.38
SMG1-214ENST00000568038 ATG5Q9H1Y0 275 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 GLS2Q9UI32 602 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 SPATA2Q9UM82 520 aa6.44□□□□□ -1.38
SMG1-214ENST00000568038 PTPN13Q12923 2485 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 A0A0A6YYD4 124 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 A0A1B0GW55 424 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 NKX6-3A6NJ46 265 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 CEACAM18A8MTB9 384 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 FAM25AB3EWG3 89 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 FAM25CB3EWG5 89 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 FAM25GB3EWG6 89 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 NDUFS8O00217 210 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 HSPB6O14558 160 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 CTDSP2O14595 271 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 SOCS1O15524 211 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 RGS5O15539 181 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 HPGDSO60760 199 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 TMEM127O75204 238 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 OR2H2O95918 312 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 EIF4EP06730 217 aaKnown RBP6.43□□□□□ -1.38
SMG1-214ENST00000568038 DUX4L2P0CJ85 424 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 DUX4L3P0CJ86 424 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 DUX4L4P0CJ87 422 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 DUX4L5P0CJ88 424 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 DUX4L6P0CJ89 424 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 DUX4L7P0CJ90 424 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 SELLP14151 372 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 CPT2P23786 658 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 BLVRBP30043 206 aaPredicted RBP6.43□□□□□ -1.38
SMG1-214ENST00000568038 PITPNBP48739 271 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 VEGFCP49767 419 aa6.43□□□□□ -1.38
SMG1-214ENST00000568038 MECP2P51608 486 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms