RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	MTCH1	Q9NZJ7	389 aa		10.57	□□□□□ -0.72
SMG1-213	ENST00000567737	ZNF580	Q9UK33	172 aa		10.57	□□□□□ -0.72
SMG1-213	ENST00000567737	BBIP1	A8MTZ0	92 aa		10.56	□□□□□ -0.72
SMG1-213	ENST00000567737		J3QR06	171 aa		10.56	□□□□□ -0.72
SMG1-213	ENST00000567737	DHRS3	O75911	302 aa		10.56	□□□□□ -0.72
SMG1-213	ENST00000567737	ATF4	P18848	351 aa	Predicted RBP	10.56	□□□□□ -0.72
SMG1-213	ENST00000567737	SOX6	P35712	828 aa		10.56	□□□□□ -0.72
SMG1-213	ENST00000567737	MAGOH	P61326	146 aa	Known RBP	10.56	□□□□□ -0.72
SMG1-213	ENST00000567737	UTF1	Q5T230	341 aa		10.56	□□□□□ -0.72
SMG1-213	ENST00000567737	OR2T10	Q8NGZ9	312 aa		10.56	□□□□□ -0.72
SMG1-213	ENST00000567737	OTOS	Q8NHW6	89 aa		10.56	□□□□□ -0.72
SMG1-213	ENST00000567737	HAVCR2	Q8TDQ0	301 aa		10.56	□□□□□ -0.72
SMG1-213	ENST00000567737	MRPS28	Q9Y2Q9	187 aa	Known RBP	10.56	□□□□□ -0.72
SMG1-213	ENST00000567737	AP3M1	Q9Y2T2	418 aa		10.56	□□□□□ -0.72
SMG1-213	ENST00000567737	IGHV4OR15-8	A0A075B7B6	117 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737		A0A087WW49	117 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	IGHV3-72	A0A0B4J1Y9	119 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	TMEM269	A0A1B0GVZ9	245 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	FAM230A	A0A1W2PPH8	454 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	ACOD1	A6NK06	481 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	ZNF729	A6NN14	1252 aa	Predicted RBP	10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	IFNG	P01579	166 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	IGHV3-7	P01780	117 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	DUSP1	P28562	367 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	GLIPR1	P48060	266 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	RAB9A	P51151	201 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	KLF10	Q13118	480 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	TMEM42	Q69YG0	159 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	IZUMO1	Q8IYV9	350 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737		Q8N6K4	173 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	S1PR3	Q99500	378 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	TEAD3	Q99594	435 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	KRT84	Q9NSB2	600 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	FAM206A	Q9NX38	181 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	IL36RN	Q9UBH0	155 aa		10.55	□□□□□ -0.72
SMG1-213	ENST00000567737	RIIAD1	A6NNX1	92 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737		H0Y980	276 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	SIRPB1	O00241	398 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	HSD17B6	O14756	317 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	IGLV3-1	P01715	115 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	ZNF3	P17036	446 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	PPIF	P30405	207 aa	Known RBP	10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	CDC42	P60953	191 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	LIPE	Q05469	1076 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	AES	Q08117	197 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	C17orf58	Q2M2W7	97 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	SAMD4B	Q5PRF9	694 aa	Known RBP	10.54	□□□□□ -0.72
SMG1-213	ENST00000567737		Q8IYB0	196 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	OR8D4	Q8NGM9	314 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	OTULIN	Q96BN8	352 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	KIRREL1	Q96J84	757 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	C7orf34	Q96L11	122 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	CADM1	Q9BY67	442 aa	Known RBP	10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	PBOV1	Q9GZY1	135 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	TOLLIP	Q9H0E2	274 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	CMTM6	Q9NX76	183 aa		10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	KLK5	Q9Y337	293 aa	Predicted RBP	10.54	□□□□□ -0.72
SMG1-213	ENST00000567737	TNC	P24821	2201 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	IGHV1-3	A0A0C4DH29	117 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	SHISA3	A0PJX4	238 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	ODAM	A1E959	279 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	IGLV1-40	P01703	118 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	LGALS1	P09382	135 aa	Known RBP	10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	GNG10	P50151	68 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	SNU13	P55769	128 aa	Known RBP	10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	ZNF816	Q0VGE8	651 aa	Predicted RBP	10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	BNIP1	Q12981	228 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	LGALS9C	Q6DKI2	356 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	CEMP1	Q6PRD7	247 aa	Predicted RBP	10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	SLC25A26	Q70HW3	274 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	ARPIN	Q7Z6K5	226 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	OR10X1	Q8NGY0	326 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	LEAP2	Q969E1	77 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	FLYWCH2	Q96CP2	140 aa	Known RBP	10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	TSSK6	Q9BXA6	273 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	MED20	Q9H944	212 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	PLSCR3	Q9NRY6	295 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	IL20	Q9NYY1	176 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	ZNF107	Q9UII5	783 aa	Predicted RBP	10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	COPS3	Q9UNS2	423 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	BAIAP2	Q9UQB8	552 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	WSB1	Q9Y6I7	421 aa		10.53	□□□□□ -0.72
SMG1-213	ENST00000567737	KBTBD11-OT1	A0A1B0GTJ5	212 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	SELENOF	O60613	162 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	CNIH1	O95406	144 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	GAPDH	P04406	335 aa	Known RBP	10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	ZNF146	Q15072	292 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	MAPRE2	Q15555	327 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	KRBOX4	Q5JUW0	171 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	SPIN3	Q5JUX0	258 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	METTL21C	Q5VZV1	264 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	WDR93	Q6P2C0	686 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	OR2T33	Q8NG76	320 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	OR8H1	Q8NGG4	311 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	LRGUK	Q96M69	825 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	EXOSC4	Q9NPD3	245 aa	Known RBP	10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	TPSG1	Q9NRR2	321 aa		10.52	□□□□□ -0.73
SMG1-213	ENST00000567737	RBFOX1	Q9NWB1	397 aa	Known RBP	10.52	□□□□□ -0.73

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