RNA–Protein interactions for RNA: ENST00000565452.1

VPS9D1-205, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 178 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-205ENST00000565452 SIRT4Q9Y6E7 314 aaPredicted RBP7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 FRAS1Q86XX4 4008 aa7.16□□□□□ -1.26
VPS9D1-205ENST00000565452 PLECQ15149 4684 aaKnown RBP7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 HECTD4Q9Y4D8 3996 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 M0QZK8 103 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 PSMD9O00233 223 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 TBX1O43435 398 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 APOL3O95236 402 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 IGLV3-1P01715 115 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 IFNA6P05013 189 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 ISG15P05161 165 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 UBCP0CG48 685 aaKnown RBP7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 BRS3P32247 399 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 OR3A4PP47883 348 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 TAS2R43P59537 309 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 GABARAPL2P60520 117 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 FAM3AP98173 230 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 ALKBH1Q13686 389 aaKnown RBP7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 SNAI3Q3KNW1 292 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 ZNF260Q3ZCT1 412 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 BCL2L15Q5TBC7 163 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 MINOS1Q5TGZ0 78 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 RPL22L1Q6P5R6 122 aaKnown RBP7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 C18orf65Q6ZTR6 163 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 AHSA2Q719I0 299 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 SSX6Q7RTT6 188 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 PRSS48Q7RTY5 328 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 WDR86Q86TI4 376 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 COMMD1Q8N668 190 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 NANOGP1Q8N7R0 232 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 OR11H6Q8NGC7 330 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 OR56B2PQ8NGI1 322 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 OR2AE1Q8NHA4 323 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 CHPT1Q8WUD6 406 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 GATAD1Q8WUU5 269 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 REEP6Q96HR9 211 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 DUX3Q96PT4 197 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 TLNRD1Q9H1K6 362 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 BABAM2Q9NXR7 383 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 MINOS1-NBL1R4GNA1 71 aa7.15□□□□□ -1.26
VPS9D1-205ENST00000565452 TMEM212A6NML5 194 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 ODF3BA8MYP8 253 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 OGG1O15527 345 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 AKR7A2O43488 359 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 RGS10O43665 173 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 RPP14O95059 124 aaKnown RBP7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 TTRP02766 147 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 TFF1P04155 84 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 CD1AP06126 327 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 SNRNP70P08621 437 aaKnown RBP7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 SLC2A1P11166 492 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 SNRPBP14678 240 aaKnown RBP7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 C21orf33P30042 268 aaPredicted RBP7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 GSK3AP49840 483 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 ETV1P50549 477 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 WNT4P56705 351 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 SLC35B1P78383 322 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 BDH1Q02338 343 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 RIPPLY1Q0D2K3 151 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 GPR50Q13585 617 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 KIR2DS1Q14954 304 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 TP53I3Q53FA7 332 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 GLYATL3Q5SZD4 288 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 ZNF626Q68DY1 528 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 ZNF782Q6ZMW2 699 aaPredicted RBP7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 OR8B12Q8NGG6 310 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 OR2G2Q8NGZ5 317 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 OR8U1Q8NH10 309 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 PELI1Q96FA3 418 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 C4orf36Q96KX1 117 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 RBM14Q96PK6 669 aaKnown RBP7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 SLC25A33Q9BSK2 321 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 MND1Q9BWT6 205 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 COMMD4Q9H0A8 199 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 ISYNA1Q9NPH2 558 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 BRD7Q9NPI1 651 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 SLC22A13Q9Y226 551 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 N6AMT1Q9Y5N5 214 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 MPC1Q9Y5U8 109 aa7.14□□□□□ -1.27
VPS9D1-205ENST00000565452 IGKV1D-17A0A075B6S4 117 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 TRBV2A0A0J9YWF9 115 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 hCG_38984A0A1B0GV85 526 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 ANXA2P2A6NMY6 339 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 C17orf98A8MV24 154 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 PRR32B1ATL7 298 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 MYL12BO14950 172 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 MAGEB4O15481 346 aaPredicted RBP7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 DHRS3O75911 302 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 OR2F2O95006 317 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 SERPINA3P01011 423 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 CST4P01036 141 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 PSG2P11465 335 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 CCL3L1P16619 93 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 JUNBP17275 347 aaPredicted RBP7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 CCL1P22362 96 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 GLRA1P23415 457 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 ARHGDIBP52566 201 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 LDLRAD2Q5SZI1 272 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 LCNL1Q6ZST4 164 aa7.13□□□□□ -1.27
VPS9D1-205ENST00000565452 SVOPQ8N4V2 548 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms