RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 ARF1P84077 181 aaKnown RBP11.63□□□□□ -0.55
CLK3-215ENST00000564353 ZXDAP98168 799 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 FAM76BQ5HYJ3 339 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 TMEM268Q5VZI3 342 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 SLC35G3Q8N808 338 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 GTF3AQ92664 365 aaKnown RBP11.63□□□□□ -0.55
CLK3-215ENST00000564353 PRRG4Q9BZD6 226 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 hCG_38984A0A1B0GV85 526 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 OR6C6A6NF89 314 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 LAMTOR5O43504 91 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 CST2P09228 141 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 SCTP09683 121 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 SPP1P10451 314 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 LYL1P12980 280 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 G0S2P27469 103 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 CAV2P51636 162 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 F2RL1P55085 397 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 MALLQ13021 153 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 SPATA46Q5T0L3 261 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 PRR18Q8N4B5 295 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 TMEM217Q8N7C4 229 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 RXFP4Q8TDU9 374 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 EIF5A2Q9GZV4 153 aaKnown RBP11.63□□□□□ -0.55
CLK3-215ENST00000564353 FGF23Q9GZV9 251 aaPredicted RBP11.63□□□□□ -0.55
CLK3-215ENST00000564353 LOXL2Q9Y4K0 774 aa11.63□□□□□ -0.55
CLK3-215ENST00000564353 FAM24AA6NFZ4 105 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 GJE1A6NN92 205 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 HSD17B6O14756 317 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 LILRA1O75019 489 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 MRPL33O75394 65 aaKnown RBP11.62□□□□□ -0.55
CLK3-215ENST00000564353 CST4P01036 141 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 CRYBA1P05813 215 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 HERV-K104P61576 105 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 DAZAP2Q15038 168 aaPredicted RBP11.62□□□□□ -0.55
CLK3-215ENST00000564353 IZUMO4Q1ZYL8 232 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 C17orf78Q8N4C9 275 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 SMIM8Q96KF7 97 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 ABHD14AQ9BUJ0 271 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 BCO1Q9HAY6 547 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 FBXO7Q9Y3I1 522 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 A0A1W2PR80 420 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 NKX2-6A6NCS4 301 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 WRBO00258 174 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 HS3ST1O14792 307 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 ATXN7O15265 892 aaPredicted RBP11.62□□□□□ -0.55
CLK3-215ENST00000564353 IGHV2-70P01814 119 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 SNRNP70P08621 437 aaKnown RBP11.62□□□□□ -0.55
CLK3-215ENST00000564353 RPP30P78346 268 aaKnown RBP11.62□□□□□ -0.55
CLK3-215ENST00000564353 TMEM182Q6ZP80 229 aaPredicted RBP11.62□□□□□ -0.55
CLK3-215ENST00000564353 LHFPL2Q6ZUX7 228 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 CPT1CQ8TCG5 803 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 PFDN5Q99471 154 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 C12orf49Q9H741 205 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 UFSP2Q9NUQ7 469 aa11.62□□□□□ -0.55
CLK3-215ENST00000564353 ARGFXA6NJG6 315 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 NDUFB7P17568 137 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 MAGEA5P43359 124 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 HOXA4Q00056 320 aaPredicted RBP11.61□□□□□ -0.55
CLK3-215ENST00000564353 DCAF12Q5T6F0 453 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 UBALD2Q8IYN6 164 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 KIRREL1Q96J84 757 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 SGCZQ96LD1 299 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 CLCC1Q96S66 551 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 OR51M1Q9H341 326 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 ZNF286AQ9HBT8 521 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 RPS10P5Q9NQ39 176 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 PPP1R14DQ9NXH3 145 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 DNAJB11Q9UBS4 358 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 MEX3AA1L020 520 aaKnown RBP11.61□□□□□ -0.55
CLK3-215ENST00000564353 TSPAN15O95858 294 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 S100PP25815 95 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 RBM11P57052 281 aaKnown RBP11.61□□□□□ -0.55
CLK3-215ENST00000564353 SURF2Q15527 256 aaPredicted RBP11.61□□□□□ -0.55
CLK3-215ENST00000564353 RDH5Q92781 318 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 EXTL1Q92935 676 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 IP6K3Q96PC2 410 aa11.61□□□□□ -0.55
CLK3-215ENST00000564353 CDRT15L2A8MXV6 281 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 H3BP45 60 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 M0R036 132 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 TERTO14746 1132 aaKnown RBP11.6□□□□□ -0.55
CLK3-215ENST00000564353 SYNGR1O43759 233 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 PDCD6O75340 191 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 CST7O76096 145 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 OR13C7P0DN81 318 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 CAMLGP49069 296 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 SULT1A2P50226 295 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 PPA1Q15181 289 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 SSX9Q7RTT3 188 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 MSI2Q96DH6 328 aaKnown RBP11.6□□□□□ -0.55
CLK3-215ENST00000564353 C14orf79Q96F83 325 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 ADGRG7Q96K78 797 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 ZNF552Q9H707 407 aaPredicted RBP11.6□□□□□ -0.55
CLK3-215ENST00000564353 TECTAO75443 2155 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 IGKV1D-13A0A0B4J2D9 117 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 C19orf67A6NJJ6 358 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 SSSCA1O60232 199 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 PPYP01298 95 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 IGKV1-13P0DP09 117 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 EPHA1P21709 976 aa11.6□□□□□ -0.55
CLK3-215ENST00000564353 HNF4GQ14541 408 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms