RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 AJUBAQ96IF1 538 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 CYYR1Q96J86 154 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 FAM192AQ9GZU8 254 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 MS4A7Q9GZW8 240 aaPredicted RBP6.99□□□□□ -1.29
UBR1-204ENST00000563239 METTL9Q9H1A3 318 aa6.99□□□□□ -1.29
UBR1-204ENST00000563239 METTL8Q9H825 291 aaKnown RBP6.99□□□□□ -1.29
UBR1-204ENST00000563239 SHISA3A0PJX4 238 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 POM121CA8CG34 1229 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 MGST3O14880 152 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 DEGS1O15121 323 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 ERP29P30040 261 aaKnown RBP6.98□□□□□ -1.29
UBR1-204ENST00000563239 GABRA5P31644 462 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 GLIPR1P48060 266 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 P2RX3P56373 397 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 EDDM3BP56851 147 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 RBM11P57052 281 aaKnown RBP6.98□□□□□ -1.29
UBR1-204ENST00000563239 BPIFB3P59826 476 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 MEF2CQ06413 473 aaPredicted RBP6.98□□□□□ -1.29
UBR1-204ENST00000563239 SCN1BQ07699 218 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 SCGB2A2Q13296 93 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 EDDM3AQ14507 147 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 TRAM1Q15629 374 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 KCTD21Q4G0X4 260 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 SLC22A6Q4U2R8 563 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 HSD17B12Q53GQ0 312 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 GPR157Q5UAW9 335 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 CD200R1LQ6Q8B3 271 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 GLIPR1L1Q6UWM5 242 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 GDPD3Q7L5L3 318 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 CMTM4Q8IZR5 234 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 OSR2Q8N2R0 312 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 JAGN1Q8N5M9 183 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 NKAIN3Q8N8D7 197 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 CHST4Q8NCG5 386 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 TMEM104Q8NE00 496 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 TBC1D15Q8TC07 691 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 ZNF418Q8TF45 676 aaPredicted RBP6.98□□□□□ -1.29
UBR1-204ENST00000563239 SLC25A28Q96A46 364 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 NR1H4Q96RI1 486 aaPredicted RBP6.98□□□□□ -1.29
UBR1-204ENST00000563239 UQCC2Q9BRT2 126 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 SUCNR1Q9BXA5 334 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 PPA2Q9H2U2 334 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 IFT22Q9H7X7 185 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 NDUFB11Q9NX14 153 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 GLS2Q9UI32 602 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 ST3GAL6Q9Y274 331 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 MRPS28Q9Y2Q9 187 aaKnown RBP6.98□□□□□ -1.29
UBR1-204ENST00000563239 STAB1Q9NY15 2570 aa6.98□□□□□ -1.29
UBR1-204ENST00000563239 ANK2Q01484 3957 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 A0A0U1RQK1 487 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 A0A1W2PRD5 423 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 A0A1W2PRF3 423 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 A0A1W2PRM7 423 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 MEGF11A6BM72 1044 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 RNF212BA8MTL3 300 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 GEMIN2O14893 280 aaKnown RBP6.97□□□□□ -1.29
UBR1-204ENST00000563239 SLC22A1O15245 554 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 MMP23AO75900 390 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 CSN2P05814 226 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 ZNF728P0DKX0 622 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 CGB3P0DN86 165 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 CGB7P0DN87 165 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 ZNF44P15621 663 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 SERPINA2P20848 420 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 PSMA1P25786 263 aaKnown RBP6.97□□□□□ -1.29
UBR1-204ENST00000563239 UBE2E1P51965 193 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 QRFPP83859 136 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 AESQ08117 197 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 SLC9A3R2Q15599 337 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 SVOPQ8N4V2 548 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 PLPPR1Q8TBJ4 325 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 CORO2AQ92828 525 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 KCTD12Q96CX2 325 aaKnown RBP6.97□□□□□ -1.29
UBR1-204ENST00000563239 TCF7L1Q9HCS4 588 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 LINC00312Q9Y6C7 94 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 DSCAML1Q8TD84 2053 aa6.97□□□□□ -1.29
UBR1-204ENST00000563239 TRDV1A0A1B0GX56 115 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 hADV38S2A0JD32 116 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 ODAMA1E959 279 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 DNAJC9-AS1A6NH13 148 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 HSPB6O14558 160 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 NPFFO15130 113 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 ZNF780AO75290 641 aaPredicted RBP6.96□□□□□ -1.3
UBR1-204ENST00000563239 RBP4P02753 201 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 MELTFP08582 738 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 IGHV1-8P0DP01 117 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 VSIG8P0DPA2 414 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 GTF2F2P13984 249 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 GDNFP39905 211 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 UBA52P62987 128 aaKnown RBP6.96□□□□□ -1.3
UBR1-204ENST00000563239 PAX5Q02548 391 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 BLMHQ13867 455 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 ATXN7L3Q14CW9 347 aaPredicted RBP6.96□□□□□ -1.3
UBR1-204ENST00000563239 TAF9Q16594 264 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 C17orf58Q2M2W7 97 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 PAN3Q58A45 887 aaKnown RBP6.96□□□□□ -1.3
UBR1-204ENST00000563239 LDLRAD2Q5SZI1 272 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 UTF1Q5T230 341 aa6.96□□□□□ -1.3
UBR1-204ENST00000563239 SYT6Q5T7P8 510 aaPredicted RBP6.96□□□□□ -1.3
UBR1-204ENST00000563239 RSBN1Q5VWQ0 802 aaPredicted RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms