RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	TRAPPC4	Q9Y296	219 aa		3.59	□□□□□ -1.83
TCF12-223	ENST00000561235	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	3.59	□□□□□ -1.83
TCF12-223	ENST00000561235	GOLT1B	Q9Y3E0	138 aa		3.59	□□□□□ -1.83
TCF12-223	ENST00000561235	KPTN	Q9Y664	436 aa		3.59	□□□□□ -1.83
TCF12-223	ENST00000561235	ATG2A	Q2TAZ0	1938 aa		3.59	□□□□□ -1.83
TCF12-223	ENST00000561235	ABCA12	Q86UK0	2595 aa		3.59	□□□□□ -1.83
TCF12-223	ENST00000561235	IGSF10	Q6WRI0	2623 aa		3.59	□□□□□ -1.83
TCF12-223	ENST00000561235	MYH10	P35580	1976 aa		3.59	□□□□□ -1.83
TCF12-223	ENST00000561235	TENM4	Q6N022	2769 aa		3.59	□□□□□ -1.83
TCF12-223	ENST00000561235	ZNF236	Q9UL36	1845 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235		A0A1B0GV72	72 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	SLC5A10	A0PJK1	596 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	PINLYP	A6NC86	204 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235		A6NDX4	124 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	TRIM49D1	C9J1S8	452 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	TMEM238	C9JI98	176 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	BHLHE40	O14503	412 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	GYG2	O15488	501 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	ENTPD5	O75356	428 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	FCN3	O75636	299 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	GATB	O75879	557 aa	Known RBP	3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	FARS2	O95363	451 aa	Known RBP	3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	FADS2	O95864	444 aa	Known RBP	3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	HOXC4	P09017	264 aa	Predicted RBP	3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	TSPAN19	P0C672	248 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	METTL15P1	P0C7V9	234 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	SCGB1A1	P11684	91 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	PMCH	P20382	165 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	TNFSF9	P41273	254 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	NSG1	P42857	185 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	MAGEA3	P43357	314 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	CDC34	P49427	236 aa	Predicted RBP	3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	EMP2	P54851	167 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	UCN	P55089	124 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	CDC42	P60953	191 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	CXCR4	P61073	352 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	TFAM	Q00059	246 aa	Known RBP	3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	PSMD5	Q16401	504 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	GUCA2B	Q16661	112 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	BSX	Q3C1V8	233 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	LRRC10	Q5BKY1	277 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	APOBEC3H	Q6NTF7	200 aa	Known RBP	3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	SPESP1	Q6UW49	350 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	IGFL2	Q6UWQ7	119 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	FAM151B	Q6UXP7	276 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	ASCL4	Q6XD76	172 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	TMPRSS11A	Q6ZMR5	421 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	SLC35D2	Q76EJ3	337 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	COX15	Q7KZN9	410 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	ANGPTL5	Q86XS5	388 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	PUSL1	Q8N0Z8	303 aa	Known RBP	3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	SLC35F6	Q8N357	371 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	RNF175	Q8N4F7	328 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	ATPAF2	Q8N5M1	289 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	ZNF433	Q8N7K0	673 aa	Predicted RBP	3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	ZNF283	Q8N7M2	679 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235		Q8N9W7	124 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	CCDC126	Q96EE4	140 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	SMIM12	Q96EX1	92 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	HSFY1	Q96LI6	401 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	HYLS1	Q96M11	299 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	RBBP8	Q99708	897 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	POTEKP	Q9BYX7	375 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	CLMP	Q9H6B4	373 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	ARMC7	Q9H6L4	198 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	MRPL47	Q9HD33	250 aa	Known RBP	3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	USE1	Q9NZ43	259 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	MED11	Q9P086	117 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	OR52A1	Q9UKL2	312 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	ROBO3	Q96MS0	1386 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	MYO10	Q9HD67	2058 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	TET1	Q8NFU7	2136 aa		3.58	□□□□□ -1.84
TCF12-223	ENST00000561235	ITPR1	Q14643	2758 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	HACD1	B0YJ81	288 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235		H3BSA7	217 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	CCL21	O00585	134 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	PRMT5	O14744	637 aa	Predicted RBP	3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	SIVA1	O15304	175 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	SOX15	O60248	233 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	MRPS14	O60783	128 aa	Known RBP	3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	SCN2B	O60939	215 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	CNMD	O75829	334 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	PIAS1	O75925	651 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	SCEL	O95171	688 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	IFNA17	P01571	189 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	IGHV2-5	P01817	119 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	C1QB	P02746	253 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	FGF1	P05230	155 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	GIMD1	P0DJR0	217 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	NR2C1	P13056	603 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	HLA-E	P13747	358 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	BGN	P21810	368 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	SDC4	P31431	198 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	MAS1L	P35410	378 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	CFHR2	P36980	270 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	RPL35	P42766	123 aa	Known RBP	3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	RAB2A	P61019	212 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	RAB5B	P61020	215 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	PKIA	P61925	76 aa		3.57	□□□□□ -1.84
TCF12-223	ENST00000561235	PSPH	P78330	225 aa		3.57	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms