RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 CLPSL1A2RUU4 121 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 SLC33A1O00400 549 aaPredicted RBP8.88□□□□□ -0.99
SPG11-216ENST00000559347 MAGEB3O15480 346 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 ALDOBP05062 364 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 ARG1P05089 322 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 C21orf33P30042 268 aaPredicted RBP8.88□□□□□ -0.99
SPG11-216ENST00000559347 OR3A4PP47883 348 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 AQP4P55087 323 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 WNT4P56705 351 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 RPS11P62280 158 aaKnown RBP eCLIP8.88□□□□□ -0.99
SPG11-216ENST00000559347 PPP3R1P63098 170 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 ATXN7L3Q14CW9 347 aaPredicted RBP8.88□□□□□ -0.99
SPG11-216ENST00000559347 AANATQ16613 207 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 Q499Y3 187 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 DDI2Q5TDH0 399 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 OLFML2AQ68BL7 652 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 Q6ZSV7 163 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 LHFPL4Q7Z7J7 247 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 TRAPPC6BQ86SZ2 158 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 Q8NFD4 153 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 BPIFB6Q8NFQ5 453 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 OR11H6Q8NGC7 330 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 OR51T1Q8NGJ9 327 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 COQ2Q96H96 371 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 SSX3Q99909 188 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 TMEM138Q9NPI0 162 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 UBE2J1Q9Y385 318 aaPredicted RBP8.88□□□□□ -0.99
SPG11-216ENST00000559347 TBL2Q9Y4P3 447 aaKnown RBP8.88□□□□□ -0.99
SPG11-216ENST00000559347 SESN1Q9Y6P5 492 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 MGAM2Q2M2H8 2515 aa8.88□□□□□ -0.99
SPG11-216ENST00000559347 IGHV2-26A0A0B4J1V2 119 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 PNMA8CA0A1B0GUJ8 204 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 MAGEA13PA6NCF6 341 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 FAM90A8PA6NJQ4 464 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 H0YJX3 145 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 IGFBP3P17936 291 aaPredicted RBP8.87□□□□□ -0.99
SPG11-216ENST00000559347 BDKRB2P30411 391 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 ZNF93P35789 620 aaPredicted RBP8.87□□□□□ -0.99
SPG11-216ENST00000559347 GLIPR1P48060 266 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 LGALS4P56470 323 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 AESQ08117 197 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 RIPK1Q13546 671 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 IL13RA2Q14627 380 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 PIGYQ3MUY2 71 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 LDLRAD2Q5SZI1 272 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 ASCL4Q6XD76 172 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 SATL1Q86VE3 508 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 DYNAPQ8N1N2 210 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 STX19Q8N4C7 294 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 OR10K1Q8NGX5 313 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 LINC01006Q8NI28 216 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 FOXRED1Q96CU9 486 aaPredicted RBP8.87□□□□□ -0.99
SPG11-216ENST00000559347 OR14A2Q96R54 314 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 PPIL3Q9H2H8 161 aaKnown RBP8.87□□□□□ -0.99
SPG11-216ENST00000559347 TMEM133Q9H2Q1 129 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 GAL3ST2Q9H3Q3 398 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 IL36GQ9NZH8 169 aa8.87□□□□□ -0.99
SPG11-216ENST00000559347 TRAV8-7A0A075B6U6 113 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 TRGV10A0A0A0MS01 117 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 TRBV5-7A0A0A0MS05 114 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 ODAMA1E959 279 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 FUOMA2VDF0 154 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 ERICH4A6NGS2 130 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 VGLL3A8MV65 326 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 HSPB6O14558 160 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 GPX5O75715 221 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 MMP23AO75900 390 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 TSPAN9O75954 239 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 CDRT1O95170 752 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 TGFBR2P37173 567 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 PTGFRP43088 359 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 SCN1BQ07699 218 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 RSU1Q15404 277 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 LY6EQ16553 131 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 NHLRC3Q5JS37 347 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 KRBOX4Q5JUW0 171 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 PRR31Q5SQ13 230 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 PRAMEF5Q5TYX0 476 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 NANOGP1Q8N7R0 232 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 PIFOQ8TCI5 191 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 CORO2AQ92828 525 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 ZNF184Q99676 751 aaPredicted RBP8.86□□□□□ -0.99
SPG11-216ENST00000559347 CLEC7AQ9BXN2 247 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 C16orf95Q9H693 158 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 ZNF696Q9H7X3 374 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 PAK1IP1Q9NWT1 392 aaPredicted RBP8.86□□□□□ -0.99
SPG11-216ENST00000559347 TAS2R3Q9NYW6 316 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 CKLFQ9UBR5 152 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 RNF114Q9Y508 228 aa8.86□□□□□ -0.99
SPG11-216ENST00000559347 TRAV24A0A0B4J272 114 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 MEGF11A6BM72 1044 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 DEGS1O15121 323 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 CHST1O43916 411 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 HTR3BO95264 441 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 CD1AP06126 327 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 CDK1P06493 297 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 CELP19835 753 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 SERPINA2P20848 420 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 CDK2P24941 298 aa8.85□□□□□ -0.99
SPG11-216ENST00000559347 GDNFP39905 211 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms