RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 DUSP1P28562 367 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 OR3A1P47881 315 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 KRTAP1-1Q07627 177 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 WDR25Q64LD2 544 aaPredicted RBP12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 ZNRF1Q8ND25 227 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 C8orf46Q8TAG6 207 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 FAM46BQ96A09 425 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 CYYR1Q96J86 154 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 DMRTB1Q96MA1 342 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 NCOR1P1Q9H4R4 102 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 HSF4Q9ULV5 492 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 A3GALT2U3KPV4 340 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 SVEP1Q4LDE5 3571 aa12.28□□□□□ -0.44
SNRPA1-207ENST00000559309 DOCK11Q5JSL3 2073 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 PPIAL4CA0A0B4J2A2 164 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 ISPDA4D126 451 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 DVL1O14640 695 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 NOL3O60936 208 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 RPS2P15880 293 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 ZFP36P26651 326 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 ERP29P30040 261 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 KCNJ3P48549 501 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 PITPNBP48739 271 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 OR8H2Q8N162 312 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 FGFRL1Q8N441 504 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 LY6G5BQ8NDX9 201 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 OR4S1Q8NGB4 309 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 RAB39BQ96DA2 213 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 URM1Q9BTM9 101 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 MIXL1Q9H2W2 232 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 SPACA1Q9HBV2 294 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 RHBDL2Q9NX52 303 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 OR14J1Q9UGF5 321 aa12.27□□□□□ -0.45
SNRPA1-207ENST00000559309 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.27□□□□□ -0.452e-8■■■■■ 37.6
SNRPA1-207ENST00000559309 A0A0A6YYH2 397 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 NKX6-3A6NJ46 265 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 A6NJ64 397 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 H3BUI4 141 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 DEGS1O15121 323 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 SOCS1O15524 211 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 PDCD6O75340 191 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 FUT3P21217 361 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 PDCD1Q15116 288 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 FAM189A2Q15884 450 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 MOGAT2Q3SYC2 334 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 PLAC9Q5JTB6 97 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 SUMF2Q8NBJ7 301 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 OR8B3Q8NGG8 313 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 OR56B1Q8NGI3 324 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 ST8SIA4Q92187 359 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 AP3S1Q92572 193 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 COQ2Q96H96 371 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 OR8B2Q96RD0 313 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 GLS2Q9UI32 602 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 KCNK7Q9Y2U2 307 aa12.26□□□□□ -0.45
SNRPA1-207ENST00000559309 SIRPB1O00241 398 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 MFNGO00587 321 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 OR7C1O76099 320 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 APOA1P02647 267 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 IGHV4-31P0DP07 118 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 CD99P14209 185 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 HOXB4P17483 251 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 SOX6P35712 828 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 GABRA2P47869 451 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 SNU13P55769 128 aaKnown RBP12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 IKZF1Q13422 519 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 CR1LQ2VPA4 569 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 TMEM249Q2WGJ8 235 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 UBE2NLQ5JXB2 153 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 RSBN1Q5VWQ0 802 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 NLRC3Q7RTR2 1065 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 RTN4RL2Q86UN3 420 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 CMTM4Q8IZR5 234 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 OR5D13Q8NGL4 314 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 OR10R2Q8NGX6 335 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 PLPPR1Q8TBJ4 325 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 RAB40AQ8WXH6 277 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 DCTN5Q9BTE1 182 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 DPCDQ9BVM2 203 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 NARFLQ9H6Q4 476 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 SLC25A10Q9UBX3 287 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 CLN8Q9UBY8 286 aa12.25□□□□□ -0.45
SNRPA1-207ENST00000559309 CCDC160A6NGH7 325 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 C22orf46C9J442 243 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 H7C1Q1 480 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 MGST3O14880 152 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 NDUFB3O43676 98 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 SCGNO76038 276 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 ECDO95905 644 aaPredicted RBP12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 CGB3P0DN86 165 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 CGB7P0DN87 165 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 ZNF44P15621 663 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 GABRR1P24046 479 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 MNDAP41218 407 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 VEGFCP49767 419 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 LRRC10Q5BKY1 277 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 RAB12Q6IQ22 244 aa12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 METAP1DQ6UB28 335 aaPredicted RBP12.24□□□□□ -0.45
SNRPA1-207ENST00000559309 Q6ZPA2 131 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms