RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 IL32P24001 234 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 PPP1CBP62140 327 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 SRSF6Q13247 344 aaKnown RBP9.66□□□□□ -0.86
CLPX-204ENST00000559152 RAB32Q13637 225 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 DAZAP2Q15038 168 aaPredicted RBP9.66□□□□□ -0.86
CLPX-204ENST00000559152 GABRA6Q16445 453 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 OR2T2Q6IF00 324 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 LGI3Q8N145 548 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 FAM58AQ8N1B3 248 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 OR5T2Q8NGG2 359 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 CNTNAP3BQ96NU0 1288 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 REG4Q9BYZ8 158 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 CNTNAP3Q9BZ76 1288 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 CRIM1Q9NZV1 1036 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 NUP50Q9UKX7 468 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 ATP23Q9Y6H3 246 aa9.66□□□□□ -0.86
CLPX-204ENST00000559152 TNRC6AQ8NDV7 1962 aaKnown RBP9.66□□□□□ -0.86
CLPX-204ENST00000559152 MYO7BQ6PIF6 2116 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 RTTNQ86VV8 2226 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 TRBV6-6A0A0A6YYG2 114 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 PIGBOS1A0A0B4J2F0 54 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 LRP5LA4QPB2 252 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 MPTX1A8MV57 137 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 TRDCB7Z8K6 153 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 SYNGR1O43759 233 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 CBR1P16152 277 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 ZP3P21754 424 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 CA6P23280 308 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 S100A10P60903 97 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 TMEM187Q14656 261 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 GGNBP1Q5YKI7 109 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 EIF5AL1Q6IS14 154 aaKnown RBP9.65□□□□□ -0.86
CLPX-204ENST00000559152 LIAT1Q6ZQX7 453 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 BAP18Q8IXM2 172 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 CNEP1R1Q8N9A8 125 aa9.65□□□□□ -0.86
CLPX-204ENST00000559152 CRYZL1O95825 349 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 OR5AC1P0C628 307 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 WT1P19544 449 aaPredicted RBP9.64□□□□□ -0.87
CLPX-204ENST00000559152 M6PRP20645 277 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 AADACP22760 399 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 IDH3GP51553 393 aaPredicted RBP9.64□□□□□ -0.87
CLPX-204ENST00000559152 RTP5Q14D33 572 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 FAM76BQ5HYJ3 339 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 GCNT2Q8N0V5 402 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 ZNF565Q8N9K5 539 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 OR51B6Q9H340 312 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 OBP2BQ9NPH6 170 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 OR5AC2Q9NZP5 309 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 TMED3Q9Y3Q3 217 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 KCNMB2Q9Y691 235 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 TMEM210A6NLX4 147 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 A8MXK9 166 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 LYZL6O75951 148 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 FGF2P09038 288 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 COX5AP20674 150 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 MDH2P40926 338 aaKnown RBP9.64□□□□□ -0.87
CLPX-204ENST00000559152 NBL1P41271 181 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 UCP2P55851 309 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 ZNF169Q14929 603 aaPredicted RBP9.64□□□□□ -0.87
CLPX-204ENST00000559152 IGFL3Q6UXB1 125 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 ASCL5Q7RTU5 278 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 C1orf174Q8IYL3 243 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 BATF2Q8N1L9 274 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 C17orf78Q8N4C9 275 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 SUMF2Q8NBJ7 301 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 BVESQ8NE79 360 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 PLEKHA2Q9HB19 425 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 PLSCR4Q9NRQ2 329 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 TREM2Q9NZC2 230 aa9.64□□□□□ -0.87
CLPX-204ENST00000559152 IQCF6A8MYZ5 107 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 K7EPK0 472 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 ZNHIT1O43257 154 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 DEDDO75618 318 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 ZNF250P15622 560 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 DUSP1P28562 367 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 S100GP29377 79 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 KIR2DL2P43627 348 aaPredicted RBP9.63□□□□□ -0.87
CLPX-204ENST00000559152 RND3P61587 244 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 PHLDA2Q53GA4 152 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 FAM71E2Q8N5Q1 922 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 RELL2Q8NC24 303 aaPredicted RBP9.63□□□□□ -0.87
CLPX-204ENST00000559152 RNF141Q8WVD5 230 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 RRNAD1Q96FB5 475 aaKnown RBP9.63□□□□□ -0.87
CLPX-204ENST00000559152 C18orf12Q96KH6 178 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 OR2J1Q9GZK6 312 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 ZC4H2Q9NQZ6 224 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 PCDHB10Q9UN67 800 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 ZNF407Q9C0G0 2248 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 CFAP47Q6ZTR5 3102 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.63□□□□□ -0.87
CLPX-204ENST00000559152 C3orf85A0A1B0GTC6 90 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 DEGS1O15121 323 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 MPPED1O15442 326 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 LILRA1O75019 489 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 IGKV3-15P01624 115 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 ACAA1P09110 424 aaPredicted RBP9.63□□□□□ -0.87
CLPX-204ENST00000559152 ACSF3Q4G176 576 aaPredicted RBP9.63□□□□□ -0.87
CLPX-204ENST00000559152 IGSF11Q5DX21 431 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 SPATA46Q5T0L3 261 aa9.63□□□□□ -0.87
CLPX-204ENST00000559152 ZNF585AQ6P3V2 769 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms