RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 BCL6BQ8N143 479 aaPredicted RBP10.26□□□□□ -0.77
LRRC28-206ENST00000558471 C11orf42Q8N5U0 333 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 CHST4Q8NCG5 386 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 PPA2Q9H2U2 334 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 BANF2Q9H503 90 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 OCEL1Q9H607 264 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 ZNF696Q9H7X3 374 aa10.26□□□□□ -0.77
LRRC28-206ENST00000558471 SOX21Q9Y651 276 aaPredicted RBP10.26□□□□□ -0.77
LRRC28-206ENST00000558471 SHISA3A0PJX4 238 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 GEMIN2O14893 280 aaKnown RBP10.25□□□□□ -0.77
LRRC28-206ENST00000558471 FPR2P25090 351 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 HTR2CP28335 458 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 ERP29P30040 261 aaKnown RBP10.25□□□□□ -0.77
LRRC28-206ENST00000558471 AESQ08117 197 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 BLMHQ13867 455 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 TAF9Q16594 264 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 GPR157Q5UAW9 335 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 C22orf42Q6IC83 251 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 BRD3OSQ6XYD6 125 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 TCF23Q7RTU1 214 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 PDZD9Q8IXQ8 264 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 BPIFB2Q8N4F0 458 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 TMEM104Q8NE00 496 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 TNFRSF14Q92956 283 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 LHX4Q969G2 390 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 SLC25A28Q96A46 364 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 MRPS24Q96EL2 167 aaKnown RBP10.25□□□□□ -0.77
LRRC28-206ENST00000558471 MS4A7Q9GZW8 240 aaPredicted RBP10.25□□□□□ -0.77
LRRC28-206ENST00000558471 SIRT7Q9NRC8 400 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 TXNL4BQ9NX01 149 aaKnown RBP10.25□□□□□ -0.77
LRRC28-206ENST00000558471 GHRLQ9UBU3 117 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 STUB1Q9UNE7 303 aa10.25□□□□□ -0.77
LRRC28-206ENST00000558471 TRAV1-2A0A0B4J238 106 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 A0A1W2PPH5 198 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 hADV38S2A0JD32 116 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 TRIM64CA6NLI5 447 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 HSPB6O14558 160 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 SLC22A1O15245 554 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 CRTAPO75718 401 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-206ENST00000558471 OR7C1O76099 320 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-206ENST00000558471 VSIG8P0DPA2 414 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 MGMTP16455 207 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 PRTN3P24158 256 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 FGF9P31371 208 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-206ENST00000558471 GLIPR1P48060 266 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 DLX6P56179 175 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 P2RX3P56373 397 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 MEF2CQ06413 473 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-206ENST00000558471 SCGB2A2Q13296 93 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 ATXN7L3Q14CW9 347 aaPredicted RBP10.24□□□□□ -0.77
LRRC28-206ENST00000558471 MPV17LQ2QL34 196 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 TUSC1Q2TAM9 212 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 PAN3Q58A45 887 aaKnown RBP10.24□□□□□ -0.77
LRRC28-206ENST00000558471 RUSC1-AS1Q66K80 236 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 OR10K2Q6IF99 312 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 OR6M1Q8NGM8 313 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 FAM46BQ96A09 425 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 COQ2Q96H96 371 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 SLC6A7Q99884 636 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 SELENOIQ9C0D9 397 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 OR51E2Q9H255 320 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 IFT22Q9H7X7 185 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 METTL8Q9H825 291 aaKnown RBP10.24□□□□□ -0.77
LRRC28-206ENST00000558471 UNKLQ9H9P5 680 aaKnown RBP10.24□□□□□ -0.77
LRRC28-206ENST00000558471 ING3Q9NXR8 418 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 V9GY05 133 aa10.24□□□□□ -0.77
LRRC28-206ENST00000558471 IGHV1-69DA0A0B4J2H0 117 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 FUOMA2VDF0 154 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 C17orf98A8MV24 154 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 RNASEK-C17orf49H0YIS7 233 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 SLC17A2O00624 439 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 IGHV1-69P01742 117 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 CSN2P05814 226 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 UBBP0CG47 229 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 ZNF728P0DKX0 622 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 CD36P16671 472 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 JUNBP17275 347 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-206ENST00000558471 GADD45AP24522 165 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 PSMD7P51665 324 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 BPIFB3P59826 476 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 SRSF2Q01130 221 aaKnown RBP10.23□□□□□ -0.77
LRRC28-206ENST00000558471 KLRD1Q13241 179 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 P2RY14Q15391 338 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 KRBOX4Q5JUW0 171 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 ATAD3CQ5T2N8 411 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 BRICD5Q6PL45 260 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 C9orf139Q6ZV77 190 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 LINC00596Q86U02 117 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 SUMF2Q8NBJ7 301 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 PLPPR1Q8TBJ4 325 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 ZNF48Q96MX3 618 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-206ENST00000558471 DPCDQ9BVM2 203 aaPredicted RBP10.23□□□□□ -0.77
LRRC28-206ENST00000558471 CST11Q9H112 138 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 KCNK15Q9H427 330 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 PLGRKTQ9HBL7 147 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 SSR3Q9UNL2 185 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 LINC00312Q9Y6C7 94 aa10.23□□□□□ -0.77
LRRC28-206ENST00000558471 ODAMA1E959 279 aa10.22□□□□□ -0.77
LRRC28-206ENST00000558471 PDCD5O14737 125 aa10.22□□□□□ -0.77
LRRC28-206ENST00000558471 TCF21O43680 179 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms