RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 RPL12P30050 165 aaKnown RBP1.92□□□□□ -2.1
SPG11-206ENST00000558093 SLC6A1P30531 599 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 FOXN2P32314 431 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 RCVRNP35243 200 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 AKR1C3P42330 323 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 MAP2K4P45985 399 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 SULT1A1P50225 295 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 SULT1A2P50226 295 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 RAB13P51153 203 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 HCCSP53701 268 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 DLX1P56177 255 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 DLX6P56179 175 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 FBXW4P57775 412 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 GNG2P59768 71 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 STXBP1P61764 594 aaKnown RBP1.92□□□□□ -2.1
SPG11-206ENST00000558093 GNG3P63215 75 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 ARG2P78540 354 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 CD164Q04900 197 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 TWF1Q12792 350 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 OR2F1Q13607 317 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 OXA1LQ15070 435 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 TSNQ15631 228 aaKnown RBP1.92□□□□□ -2.1
SPG11-206ENST00000558093 TRIP13Q15645 432 aaPredicted RBP1.92□□□□□ -2.1
SPG11-206ENST00000558093 LRRC75BQ2VPJ9 315 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 HLA-DRB5Q30154 266 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 DEFB116Q30KQ4 102 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 DEFB115Q30KQ5 88 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 SMIM21Q3B7S5 101 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 TTLL9Q3SXZ7 439 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 ZBED5Q49AG3 693 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 LRRC10Q5BKY1 277 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 LPCAT3Q6P1A2 487 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 EPGNQ6UW88 154 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 Q6ZN92 141 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 FAM19A5Q7Z5A7 132 aaPredicted RBP1.92□□□□□ -2.1
SPG11-206ENST00000558093 GALNT10Q86SR1 603 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 COMMD7Q86VX2 200 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 ANGPTL5Q86XS5 388 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 SLC30A8Q8IWU4 369 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 CPNE9Q8IYJ1 553 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 LYPD1Q8N2G4 141 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 ARRDC1Q8N5I2 433 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 CYB561D1Q8N8Q1 229 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 OR8G5Q8NG78 346 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 OR2M7Q8NG81 312 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 GPR32P1Q8NGA4 272 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 OR6N1Q8NGY5 312 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 CD200R1Q8TD46 325 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 Q8WTZ3 238 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 FGF11Q92914 225 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 STMN2Q93045 179 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 TCEAL3Q969E4 200 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 TMBIM1Q969X1 311 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 EEF1AKMT3Q96AZ1 226 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 DNAJC19Q96DA6 116 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 L3HYPDHQ96EM0 354 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 SEC22AQ96IW7 307 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 HSFY1Q96LI6 401 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 ZNF681Q96N22 645 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 HBEGFQ99075 208 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 GABRG3Q99928 467 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 APOL4Q9BPW4 351 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 VPS25Q9BRG1 176 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 CCDC90BQ9GZT6 254 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 MS4A6AQ9H2W1 248 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 MIXL1Q9H2W2 232 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 OR51I1Q9H343 314 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 RBKSQ9H477 322 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 REEP4Q9H6H4 257 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 SIAEQ9HAT2 523 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 BIN3Q9NQY0 253 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 FBXO6Q9NRD1 293 aaPredicted RBP1.92□□□□□ -2.1
SPG11-206ENST00000558093 SPANXB1Q9NS25 103 aaPredicted RBP1.92□□□□□ -2.1
SPG11-206ENST00000558093 COA4Q9NYJ1 87 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 LGALS13Q9UHV8 139 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 TRAPPC4Q9Y296 219 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 SLC35A3Q9Y2D2 325 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 ZNF518AQ6AHZ1 1483 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 MRC2Q9UBG0 1479 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 DOCK9Q9BZ29 2069 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 PIKFYVEQ9Y2I7 2098 aa1.92□□□□□ -2.1
SPG11-206ENST00000558093 SOGA1O94964 1423 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 NPATQ14207 1427 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 BAZ2AQ9UIF9 1905 aaKnown RBP1.91□□□□□ -2.1
SPG11-206ENST00000558093 A0A087WUJ7 227 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 A0A0G2JMP0 313 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 A0A0G2JN53 185 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 SPRR5A0A1B0GTR4 108 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 CCDC160A6NGH7 325 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 EVPLLA8MZ36 301 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 IDSB3KWA1 339 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 K7EP13 123 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 CDC7O00311 574 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 CCL21O00585 134 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 NME4O00746 187 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 FABP7O15540 132 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 SOX15O60248 233 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 PLIN3O60664 434 aa1.91□□□□□ -2.1
SPG11-206ENST00000558093 EEDO75530 441 aaKnown RBP1.91□□□□□ -2.1
SPG11-206ENST00000558093 OR2B3O76000 313 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms