RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 C22orf46C9J442 243 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 GPR37O15354 613 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 ECDO95905 644 aaPredicted RBP17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A15PP0C7V4 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A13PP0C7W8 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A14PP0C7W9 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A24PP0C7X0 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 OR3A1P47881 315 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 RORCP51449 518 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 EFNB2P52799 333 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 GDPD3Q7L5L3 318 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 GLCCI1Q86VQ1 547 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 BPIFB2Q8N4F0 458 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 SUMF2Q8NBJ7 301 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 LGALS14Q8TCE9 139 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 TMEM186Q96B77 213 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 NICN1Q9BSH3 213 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 DPCDQ9BVM2 203 aaPredicted RBP17.62■□□□□ 0.41
CASC4-204ENST00000557945 TM2D1Q9BX74 207 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 BARHL1Q9BZE3 327 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 SHARPINQ9H0F6 387 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 LPAR5Q9H1C0 372 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 SPACA1Q9HBV2 294 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 HIF1ANQ9NWT6 349 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 ING3Q9NXR8 418 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 DOCK11Q5JSL3 2073 aa17.61■□□□□ 0.41
CASC4-204ENST00000557945 TRAV20A0A0B4J274 112 aa17.61■□□□□ 0.41
CASC4-204ENST00000557945 EDDM3BP56851 147 aa17.61■□□□□ 0.41
CASC4-204ENST00000557945 BRICD5Q6PL45 260 aa17.61■□□□□ 0.41
CASC4-204ENST00000557945 OR4M1Q8NGD0 313 aa17.61■□□□□ 0.41
CASC4-204ENST00000557945 NEK7Q8TDX7 302 aa17.61■□□□□ 0.41
CASC4-204ENST00000557945 MRI1Q9BV20 369 aa17.61■□□□□ 0.41
CASC4-204ENST00000557945 IFT22Q9H7X7 185 aa17.61■□□□□ 0.41
CASC4-204ENST00000557945 MMP26Q9NRE1 261 aa17.61■□□□□ 0.41
CASC4-204ENST00000557945 PEX16Q9Y5Y5 336 aa17.61■□□□□ 0.41
CASC4-204ENST00000557945 ARHGAP32A7KAX9 2087 aa17.61■□□□□ 0.41
CASC4-204ENST00000557945 H3BUI4 141 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 MGST3O14880 152 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 CD5LO43866 347 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 TMEM127O75204 238 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 RAB6AP20340 208 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 KRTAP1-1Q07627 177 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 ATXN7L3Q14CW9 347 aaPredicted RBP17.6■□□□□ 0.41
CASC4-204ENST00000557945 NKAPLQ5M9Q1 402 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 RAB12Q6IQ22 244 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 RAB40AQ8WXH6 277 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 POM121Q96HA1 1249 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 NEDD4LQ96PU5 975 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 NUDT16L1Q9BRJ7 211 aaKnown RBP17.6■□□□□ 0.41
CASC4-204ENST00000557945 DCTN5Q9BTE1 182 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 RBM38Q9H0Z9 239 aaKnown RBP17.6■□□□□ 0.41
CASC4-204ENST00000557945 ATG5Q9H1Y0 275 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 ABRACLQ9P1F3 81 aa17.6■□□□□ 0.41
CASC4-204ENST00000557945 RSL24D1Q9UHA3 163 aaKnown RBP17.6■□□□□ 0.41
CASC4-204ENST00000557945 RPUSD1Q9UJJ7 312 aaKnown RBP17.6■□□□□ 0.41
CASC4-204ENST00000557945 POLR3KQ9Y2Y1 108 aaPredicted RBP17.6■□□□□ 0.41
CASC4-204ENST00000557945 F8P00451 2351 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 A0A0A6YYD4 124 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 IGHV2-70DA0A0C4DH43 119 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 SMIM31A0A1B0GVY4 71 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 A0A1W2PQ09 198 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 ENSAO43768 121 aaKnown RBP17.59■□□□□ 0.41
CASC4-204ENST00000557945 PDCD6O75340 191 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 LY6G6DO95868 133 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 FUT3P21217 361 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 BLVRBP30043 206 aaPredicted RBP17.59■□□□□ 0.41
CASC4-204ENST00000557945 VEGFCP49767 419 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 DVL1P1P54792 670 aaPredicted RBP17.59■□□□□ 0.41
CASC4-204ENST00000557945 C11orf91Q3C1V1 193 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 DCAF12L2Q5VW00 463 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 SIGIRRQ6IA17 410 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 BTNL3Q6UXE8 466 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 CLEC9AQ6UXN8 241 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 BIVMQ86UB2 503 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 FAM185AQ8N0U4 392 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 OR5H6Q8NGV6 325 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 PTX4Q96A99 478 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 C19orf12Q9NSK7 152 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 ETV7Q9Y603 341 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.59■□□□□ 0.41
CASC4-204ENST00000557945 HIVEP1P15822 2718 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 CELSR1Q9NYQ6 3014 aa17.59■□□□□ 0.41
CASC4-204ENST00000557945 A0A0G2JMP0 313 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 A0A0X1KG70 313 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 DPPA5A6NC42 116 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 METTL21EPA6NDL7 271 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 MCRIP1C9JLW8 97 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 SOCS1O15524 211 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 SCAND1P57086 179 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 RPL31P62899 125 aaKnown RBP17.58■□□□□ 0.4
CASC4-204ENST00000557945 AESQ08117 197 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 FAM189A2Q15884 450 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 FAHD2BQ6P2I3 314 aaPredicted RBP17.58■□□□□ 0.4
CASC4-204ENST00000557945 TPRX1Q8N7U7 411 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 OR4M2Q8NGB6 313 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 OR56B1Q8NGI3 324 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 FAHD2AQ96GK7 314 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 YAE1D1Q9NRH1 226 aa17.58■□□□□ 0.4
CASC4-204ENST00000557945 RCC2Q9P258 522 aaKnown RBP17.58■□□□□ 0.4
CASC4-204ENST00000557945 TRBV23-1A0A0A0MS06 115 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms