RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 TAF9Q16594 264 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 PAN3Q58A45 887 aaKnown RBP11.8□□□□□ -0.52
USP3-205ENST00000557884 C1orf100Q5SVJ3 147 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 LCE2DQ5TA82 110 aaPredicted RBP11.8□□□□□ -0.52
USP3-205ENST00000557884 TMEM200BQ69YZ2 307 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 VMO1Q7Z5L0 202 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 PDZD9Q8IXQ8 264 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 CMTM4Q8IZR5 234 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 BPIFB2Q8N4F0 458 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 CHST4Q8NCG5 386 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 OR5D13Q8NGL4 314 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 OR6M1Q8NGM8 313 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 PPP1R35Q8TAP8 253 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 C22orf15Q8WYQ4 148 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 UPRTQ96BW1 309 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 SELENOIQ9C0D9 397 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 SIRT7Q9NRC8 400 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 PCDHB16Q9NRJ7 776 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 KPTNQ9Y664 436 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 WNK2Q9Y3S1 2297 aa11.8□□□□□ -0.52
USP3-205ENST00000557884 C2CD3Q4AC94 2353 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 TRAV1-2A0A0B4J238 106 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 TRIM64CA6NLI5 447 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 PDCD5O14737 125 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 MGST3O14880 152 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 MPIG6BO95866 241 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 MGMTP16455 207 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 CCL3L1P16619 93 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 EPHA1P21709 976 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 GALP22466 123 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 LMO1P25800 156 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 CLDN12P56749 244 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 RIPPLY3P57055 190 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 AESQ08117 197 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 NHLRC3Q5JS37 347 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 HES5Q5TA89 166 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 BRICD5Q6PL45 260 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 KIR3DL3Q8N743 410 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 Q8N7P7 452 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 LHX4Q969G2 390 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 RNF167Q9H6Y7 350 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 V9GY05 133 aa11.79□□□□□ -0.52
USP3-205ENST00000557884 SLC17A2O00624 439 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 UBBP0CG47 229 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 VSIG8P0DPA2 414 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 CD37P11049 281 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 JUNBP17275 347 aaPredicted RBP11.78□□□□□ -0.52
USP3-205ENST00000557884 FGF9P31371 208 aaPredicted RBP11.78□□□□□ -0.52
USP3-205ENST00000557884 GLIPR1P48060 266 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 P2RX3P56373 397 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 ERVFRD-1P60508 538 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 KLRD1Q13241 179 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 BLMHQ13867 455 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 ATAD3CQ5T2N8 411 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 SUMF2Q8NBJ7 301 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 SLC25A28Q96A46 364 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 POM121Q96HA1 1249 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 CST11Q9H112 138 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 GHRLQ9UBU3 117 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 ZNF69Q9UC07 566 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 NUP50Q9UKX7 468 aa11.78□□□□□ -0.52
USP3-205ENST00000557884 SOX21Q9Y651 276 aaPredicted RBP11.78□□□□□ -0.52
USP3-205ENST00000557884 hADV38S2A0JD32 116 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 M0R1W7 72 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 BPNT1O95861 308 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 RAB3BP20337 219 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 PSMD7P51665 324 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 UNC119Q13432 240 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 MPV17LQ2QL34 196 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 KRBOX4Q5JUW0 171 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 GPR157Q5UAW9 335 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 RUSC1-AS1Q66K80 236 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 BRD3OSQ6XYD6 125 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 TCF23Q7RTU1 214 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 TRAPPC6BQ86SZ2 158 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 LINC00596Q86U02 117 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 PRIMA1Q86XR5 153 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 BCL6BQ8N143 479 aaPredicted RBP11.77□□□□□ -0.53
USP3-205ENST00000557884 YIPF6Q96EC8 236 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 MRPS24Q96EL2 167 aaKnown RBP11.77□□□□□ -0.53
USP3-205ENST00000557884 COQ2Q96H96 371 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 CYYR1Q96J86 154 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 Q96M66 194 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 KCTD7Q96MP8 289 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 SLC6A7Q99884 636 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 CENPOQ9BU64 300 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 DPCDQ9BVM2 203 aaPredicted RBP11.77□□□□□ -0.53
USP3-205ENST00000557884 OCEL1Q9H607 264 aa11.77□□□□□ -0.53
USP3-205ENST00000557884 A0A0B4J203 849 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 CENPVL3A0A0U1RRI6 287 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 A0A1W2PPH5 198 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 A0A1W2PRD5 423 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 A0A1W2PRF3 423 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 A0A1W2PRM7 423 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 ODAMA1E959 279 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 ARSBP15848 533 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 ERP29P30040 261 aaKnown RBP11.76□□□□□ -0.53
USP3-205ENST00000557884 SDC2P34741 201 aa11.76□□□□□ -0.53
USP3-205ENST00000557884 LSM3P62310 102 aaKnown RBP11.76□□□□□ -0.53
USP3-205ENST00000557884 QRFPP83859 136 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms