RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 TAF9Q16594 264 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 NHLRC3Q5JS37 347 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 HES5Q5TA89 166 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 CHST4Q8NCG5 386 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 YIPF6Q96EC8 236 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 WDFY2Q96P53 400 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 TBX15Q96SF7 602 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 CENPOQ9BU64 300 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 SELENOIQ9C0D9 397 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 SIRPDQ9H106 197 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 PCDHB16Q9NRJ7 776 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 ING3Q9NXR8 418 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 V9GY05 133 aa14.4□□□□□ -0.1
SHMT2-225ENST00000556798 TRAV40A0A0B4J280 105 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 SLC17A2O00624 439 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 PDCD5O14737 125 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 MGST3O14880 152 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 MPIG6BO95866 241 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 FSHBP01225 129 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 FAM157CP0CG43 387 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 IGHV4-38-2P0DP08 117 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 VSIG8P0DPA2 414 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 CCL3L1P16619 93 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 DLX1P56177 255 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 RAB11BQ15907 218 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 PAN3Q58A45 887 aaKnown RBP14.39□□□□□ -0.11
SHMT2-225ENST00000556798 KLF17Q5JT82 389 aaPredicted RBP14.39□□□□□ -0.11
SHMT2-225ENST00000556798 TMEM200BQ69YZ2 307 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 BPIFB2Q8N4F0 458 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 OR5D13Q8NGL4 314 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 PPP1R35Q8TAP8 253 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 NANPQ8TBE9 248 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 SLC25A28Q96A46 364 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 UPRTQ96BW1 309 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 CST11Q9H112 138 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 GHRLQ9UBU3 117 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 CUBNO60494 3623 aa14.39□□□□□ -0.11
SHMT2-225ENST00000556798 UBBP0CG47 229 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 RAB3BP20337 219 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 AESQ08117 197 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 UNC119Q13432 240 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 ATAD3CQ5T2N8 411 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 TCF23Q7RTU1 214 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 VMO1Q7Z5L0 202 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 NR2C2APQ86WQ0 139 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 CMTM4Q8IZR5 234 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 Q8N7P7 452 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 SUMF2Q8NBJ7 301 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 MRPS26Q9BYN8 205 aaKnown RBP14.38□□□□□ -0.11
SHMT2-225ENST00000556798 SIRT7Q9NRC8 400 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 KPTNQ9Y664 436 aa14.38□□□□□ -0.11
SHMT2-225ENST00000556798 JMJD1CQ15652 2540 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 BPNT1O95861 308 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 TGFBR1P36897 503 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 P2RX3P56373 397 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 MPV17LQ2QL34 196 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 BRICD5Q6PL45 260 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 LINC00596Q86U02 117 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 PDZD9Q8IXQ8 264 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 TEX29Q8N6K0 151 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 KIR3DL3Q8N743 410 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 OR51D1Q8NGF3 324 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 C22orf15Q8WYQ4 148 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 MRPS24Q96EL2 167 aaKnown RBP14.37□□□□□ -0.11
SHMT2-225ENST00000556798 COQ2Q96H96 371 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 CYYR1Q96J86 154 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 Q96M66 194 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 KCTD7Q96MP8 289 aa14.37□□□□□ -0.11
SHMT2-225ENST00000556798 DPCDQ9BVM2 203 aaPredicted RBP14.37□□□□□ -0.11
SHMT2-225ENST00000556798 A0A0B4J203 849 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 AIREO43918 545 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 ARSBP15848 533 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 EPHA1P21709 976 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 SDC2P34741 201 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 GLIPR1P48060 266 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 PSMD7P51665 324 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 ERVFRD-1P60508 538 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 LSM3P62310 102 aaKnown RBP14.36□□□□□ -0.11
SHMT2-225ENST00000556798 QRFPP83859 136 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 MXD1Q05195 221 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 KRBOX4Q5JUW0 171 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 PLPPR1Q8TBJ4 325 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 LHX4Q969G2 390 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 POM121Q96HA1 1249 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 DMRTB1Q96MA1 342 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 NICN1Q9BSH3 213 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 TMEM59Q9BXS4 323 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 IFT22Q9H7X7 185 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 STEAP1Q9UHE8 339 aa14.36□□□□□ -0.11
SHMT2-225ENST00000556798 hADV38S2A0JD32 116 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 IFITM5A6NNB3 132 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 TMEM14DPA8MWL7 114 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 M0R1W7 72 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 CSN2P05814 226 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 CLEC2LP0C7M8 214 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 SLC2A2P11168 524 aaPredicted RBP14.35□□□□□ -0.11
SHMT2-225ENST00000556798 ERP29P30040 261 aaKnown RBP14.35□□□□□ -0.11
SHMT2-225ENST00000556798 KLRD1Q13241 179 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 BLMHQ13867 455 aa14.35□□□□□ -0.11
SHMT2-225ENST00000556798 TIMM50Q3ZCQ8 353 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms