RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 MEF2CQ06413 473 aaPredicted RBP7.91□□□□□ -1.14
SRP54-210ENST00000556380 IL13RA2Q14627 380 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 PDCD1Q15116 288 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 C1orf100Q5SVJ3 147 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 METTL11BQ5VVY1 283 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 HCP5Q6MZN7 132 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 CD200R1LQ6Q8B3 271 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 USP43Q70EL4 1123 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 TCF23Q7RTU1 214 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 ASCC1Q8N9N2 400 aaKnown RBP7.91□□□□□ -1.14
SRP54-210ENST00000556380 OR4D6Q8NGJ1 314 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 OR5D13Q8NGL4 314 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 TBC1D15Q8TC07 691 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 ZNF48Q96MX3 618 aaPredicted RBP7.91□□□□□ -1.14
SRP54-210ENST00000556380 GFI1Q99684 422 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 SLC6A7Q99884 636 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 UQCC2Q9BRT2 126 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 METTL9Q9H1A3 318 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 PRDM13Q9H4Q3 707 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 IFT22Q9H7X7 185 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 EXOSC4Q9NPD3 245 aaKnown RBP7.91□□□□□ -1.14
SRP54-210ENST00000556380 NDUFB11Q9NX14 153 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 ZNF581Q9P0T4 197 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 ONECUT1Q9UBC0 465 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 ING4Q9UNL4 249 aa7.91□□□□□ -1.14
SRP54-210ENST00000556380 A0A0A6YYJ9 748 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 TRAV40A0A0B4J280 105 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 A0A1W2PP11 408 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 C17orf98A8MV24 154 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 RNASEK-C17orf49H0YIS7 233 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 SIRPB1O00241 398 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 MGST3O14880 152 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 DEGS1O15121 323 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 VENTXO95231 258 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 HTR3BO95264 441 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 CSN2P05814 226 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 GABRR1P24046 479 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 FPR2P25090 351 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 ERP29P30040 261 aaKnown RBP7.9□□□□□ -1.14
SRP54-210ENST00000556380 DLX1P56177 255 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 SRSF2Q01130 221 aaKnown RBP7.9□□□□□ -1.14
SRP54-210ENST00000556380 SCGB2A2Q13296 93 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 ZNF273Q14593 569 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 RSU1Q15404 277 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 GRK1Q15835 563 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 PIGYQ3MUY2 71 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 HSD17B12Q53GQ0 312 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 METAP1DQ6UB28 335 aaPredicted RBP7.9□□□□□ -1.14
SRP54-210ENST00000556380 GLIPR1L1Q6UWM5 242 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 Q6ZS46 218 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 VMO1Q7Z5L0 202 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 FAM185AQ8N0U4 392 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 OSR2Q8N2R0 312 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 JAGN1Q8N5M9 183 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 NKAIN3Q8N8D7 197 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 CHST4Q8NCG5 386 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 C22orf15Q8WYQ4 148 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 LHX4Q969G2 390 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 MUL1Q969V5 352 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 FAM192AQ9GZU8 254 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 CHST6Q9GZX3 395 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 METTL8Q9H825 291 aaKnown RBP7.9□□□□□ -1.14
SRP54-210ENST00000556380 GLS2Q9UI32 602 aa7.9□□□□□ -1.14
SRP54-210ENST00000556380 MRPS28Q9Y2Q9 187 aaKnown RBP7.9□□□□□ -1.14
SRP54-210ENST00000556380 IGHV1-69DA0A0B4J2H0 117 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 TRDV1A0A1B0GX56 115 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 A0A1W2PQ09 198 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 TRIM64CA6NLI5 447 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 TCF21O43680 179 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 ZNF780AO75290 641 aaPredicted RBP7.89□□□□□ -1.15
SRP54-210ENST00000556380 IGHV1-69P01742 117 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 CCL3L1P16619 93 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 GALP22466 123 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 P2RX3P56373 397 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 RBM11P57052 281 aaKnown RBP7.89□□□□□ -1.15
SRP54-210ENST00000556380 HILS1P60008 231 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 ERVFRD-1P60508 538 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 QRFPP83859 136 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 PAX5Q02548 391 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 PRB3Q04118 309 aaPredicted RBP7.89□□□□□ -1.15
SRP54-210ENST00000556380 SCN1BQ07699 218 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 SLC22A6Q4U2R8 563 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 SYT6Q5T7P8 510 aaPredicted RBP7.89□□□□□ -1.15
SRP54-210ENST00000556380 GPR157Q5UAW9 335 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 RUSC1-AS1Q66K80 236 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 BRD3OSQ6XYD6 125 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 GDPD3Q7L5L3 318 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 CMTM4Q8IZR5 234 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 SIGLECL1Q8N7X8 197 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 ZDHHC22Q8N966 263 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 TMEM104Q8NE00 496 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 PPP1R35Q8TAP8 253 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 FCGR1BQ92637 280 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 CORO2AQ92828 525 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 SLC25A28Q96A46 364 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 FOXRED1Q96CU9 486 aaPredicted RBP7.89□□□□□ -1.15
SRP54-210ENST00000556380 MRPS24Q96EL2 167 aaKnown RBP7.89□□□□□ -1.15
SRP54-210ENST00000556380 COQ2Q96H96 371 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 AJUBAQ96IF1 538 aa7.89□□□□□ -1.15
SRP54-210ENST00000556380 NR1H4Q96RI1 486 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms