RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CD37P11049 281 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 SLC2A1P11166 492 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 FCGR2AP12318 317 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 LYL1P12980 280 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 FOLR1P15328 257 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 CCL1P22362 96 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 S100GP29377 79 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 BLVRBP30043 206 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 RPL12P30050 165 aaKnown RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 SFTPDP35247 375 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 RPL35P42766 123 aaKnown RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 CAMLGP49069 296 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 HOXA1P49639 335 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 RAB13P51153 203 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 CLDN17P56750 224 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 TMPRSS3P57727 454 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 LSM6P62312 80 aaKnown RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 S100A12P80511 92 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 DCDP81605 110 aaKnown RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 QRFPP83859 136 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF616Q08AN1 781 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 PDZK1IP1Q13113 114 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 RSU1Q15404 277 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 IAH1Q2TAA2 248 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 MS4A18Q3C1V0 323 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 NKAIN1Q4KMZ8 207 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 FAM74A3Q4VXF1 159 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 SLC25A53Q5H9E4 307 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 RAET1LQ5VY80 246 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 NSUN5P2Q63ZY6 315 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 RHBDD2Q6NTF9 364 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 SLC25A47Q6Q0C1 308 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 CLEC18BQ6UXF7 455 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 CPEB2Q7Z5Q1 589 aaKnown RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 C17orf82Q86X59 251 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 FOXRED2Q8IWF2 684 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 PUSL1Q8N0Z8 303 aaKnown RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 OR5AS1Q8N127 324 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 POC1AQ8NBT0 407 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 SLC38A9Q8NBW4 561 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 LFNGQ8NES3 379 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 GJC3Q8NFK1 279 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 SPSB1Q96BD6 273 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 INTS12Q96CB8 462 aaKnown RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF501Q96CX3 271 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 ARHGAP5-AS1Q96IT6 56 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 ARL5BQ96KC2 179 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 SPACA5Q96QH8 159 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 OR6C1Q96RD1 312 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 SPIN2AQ99865 258 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 SPIN2BQ9BPZ2 258 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 KLHDC3Q9BQ90 382 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 NRIP2Q9BQI9 281 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 SULT4A1Q9BR01 284 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 NICN1Q9BSH3 213 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 ST6GALNAC5Q9BVH7 336 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 PECRQ9BY49 303 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 DEFB126Q9BYW3 111 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 ULBP2Q9BZM5 246 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 PRSS22Q9GZN4 317 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 HRH4Q9H3N8 390 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF286AQ9HBT8 521 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 PARP11Q9NR21 331 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 SMCO4Q9NRQ5 59 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 FAM212BQ9NTI7 297 aaPredicted RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 UQCC1Q9NVA1 299 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 NECAP2Q9NVZ3 263 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 LUZP4Q9P127 313 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 GPR132Q9UNW8 380 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 KCNK7Q9Y2U2 307 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 STRAPQ9Y3F4 350 aaKnown RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 LSM5Q9Y4Y9 91 aaKnown RBP3.81□□□□□ -1.8
ATXN3-241ENST00000556374 LHFPL6Q9Y693 200 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 BSNQ9UPA5 3926 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 NBASA2RRP1 2371 aa3.81□□□□□ -1.8
ATXN3-241ENST00000556374 CABIN1Q9Y6J0 2220 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 DOCK9Q9BZ29 2069 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 IGKV1D-43A0A0B4J1Z2 117 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 IGHV3-20A0A0C4DH32 117 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 A0A0U1RQV5 110 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 LOC101059948A0A1B0GTJ6 334 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 LOC102725191A0A1B0GVB3 256 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 CLEC18AA5D8T8 446 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 ZNF850A8MQ14 1090 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 C17orf51A8MQB3 221 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 C10orf142B7Z368 130 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 E5RGE8 158 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 F5H5K5 113 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 H0YIZ8 118 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 STMND1H3BQB6 276 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 M0R135 149 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 SOCS1O15524 211 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 NDUFA2O43678 99 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 GPR137BO60478 399 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 ADAP1O75689 374 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 VAMP5O95183 116 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 GAPDHP04406 335 aaKnown RBP3.8□□□□□ -1.8
ATXN3-241ENST00000556374 S100A8P05109 93 aa3.8□□□□□ -1.8
ATXN3-241ENST00000556374 SFTA3P0C7M3 94 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms