RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 OR4K2Q8NGD2 314 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 OR6K2Q8NGY2 324 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 OR6K3Q8NGY3 331 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 OR52E5Q8NH55 327 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 RNASEH2CQ8TDP1 164 aaKnown RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 TFGQ92734 400 aaPredicted RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 TMEM203Q969S6 136 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 MYLPFQ96A32 169 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 RERGQ96A58 199 aaPredicted RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 APH1AQ96BI3 265 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 TLCD1Q96CP7 247 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 CXorf40BQ96DE9 158 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 NUS1Q96E22 293 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 L3HYPDHQ96EM0 354 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 PELI1Q96FA3 418 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 VSIG2Q96IQ7 327 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 ITCHQ96J02 903 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 MS4A14Q96JA4 679 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 ZNF75AQ96N20 296 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 MBOAT4Q96T53 435 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 FMO2Q99518 471 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 SDHCQ99643 169 aaPredicted RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 FOXC2Q99958 501 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 ECSITQ9BQ95 431 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 TMEM121Q9BTD3 319 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 RAB34Q9BZG1 259 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 TLNRD1Q9H1K6 362 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 TMEM38AQ9H6F2 299 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 MIEF1Q9NQG6 463 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 INPP5EQ9NRR6 644 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 PAK1IP1Q9NWT1 392 aaPredicted RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 CLN6Q9NWW5 311 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 COA4Q9NYJ1 87 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 ZNF391Q9UJN7 358 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 TFR2Q9UP52 801 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 KCNIP3Q9Y2W7 256 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 PEX16Q9Y5Y5 336 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 KIF25-AS1Q9Y6Z4 181 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 TENM3Q9P273 2699 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 ANK2Q01484 3957 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 IGLV8-61A0A075B6I0 122 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 EFCAB9A8MZ26 197 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 OR11H12B2RN74 326 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 FTCDNL1E5RQL4 147 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 M0QYV0 167 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 SIRPB1O00241 398 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 PPP1R2P9O14990 202 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 UBDO15205 165 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 DLEU1O43261 78 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 SSNA1O43805 119 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 CHST1O43916 411 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 RAD1O60671 282 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 BANF1O75531 89 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 OR2B3O76000 313 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 CNIH1O95406 144 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 TDP2O95551 362 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 TMEM50AO95807 157 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 TSPAN13O95857 204 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 CYB5R3P00387 301 aaPredicted RBP2.43□□□□□ -2.02
SRP54-209ENST00000555746 HLA-AP01891 365 aaKnown RBP2.43□□□□□ -2.02
SRP54-209ENST00000555746 MT-ND4P03905 459 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 GAPDHP04406 335 aaKnown RBP2.43□□□□□ -2.02
SRP54-209ENST00000555746 ISG15P05161 165 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 RHOCP08134 193 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 CD55P08174 381 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 OR8U9P0C7N5 309 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 C1GALT1C1LP0DN25 315 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 HIST1H1CP16403 213 aaKnown RBP2.43□□□□□ -2.02
SRP54-209ENST00000555746 KITLGP21583 273 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 PAX6P26367 422 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 PRDX3P30048 256 aaKnown RBP2.43□□□□□ -2.02
SRP54-209ENST00000555746 RPL13AP40429 203 aaKnown RBP2.43□□□□□ -2.02
SRP54-209ENST00000555746 NOVP48745 357 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 CX3CR1P49238 355 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 HLCSP50747 726 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 CCR6P51684 374 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 EFNB2P52799 333 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 UGT2B15P54855 530 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 SNAP25P60880 206 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 RPL8P62917 257 aaKnown RBP2.43□□□□□ -2.02
SRP54-209ENST00000555746 BTN3A2P78410 334 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 IGLV3-21P80748 117 aaPredicted RBP2.43□□□□□ -2.02
SRP54-209ENST00000555746 HMGCS1Q01581 520 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 C2orf80Q0P641 193 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 ZNF154Q13106 437 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 SELENBP1Q13228 472 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 APOFQ13790 326 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 KCNJ11Q14654 390 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 KIAA0040Q15053 153 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 TSNQ15631 228 aaKnown RBP2.43□□□□□ -2.02
SRP54-209ENST00000555746 ATP6AP1Q15904 470 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 PRR4Q16378 134 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 CLLU1OSQ5K130 101 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 SAXO2Q658L1 398 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 PVRIGQ6DKI7 326 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 FAHD1Q6P587 224 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 CYS1Q717R9 158 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 SLC36A1Q7Z2H8 476 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 OR2W3Q7Z3T1 314 aa2.43□□□□□ -2.02
SRP54-209ENST00000555746 RIMKLAQ8IXN7 391 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms