RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 AQP6Q13520 282 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 ZNF384Q8TF68 577 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 C16orf92Q96LL3 132 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM272A0A1B0GTI8 110 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 HOXC11O43248 304 aaPredicted RBP6.13□□□□□ -1.43
SYNE2-216ENST00000555002 CDX1P47902 265 aaPredicted RBP6.13□□□□□ -1.43
SYNE2-216ENST00000555002 REG1BP48304 166 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 STAC2Q6ZMT1 411 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 DMRTA2Q96SC8 542 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 DCTN5Q9BTE1 182 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 PTBP1P26599 531 aaKnown RBP eCLIP6.13□□□□□ -1.43
SYNE2-216ENST00000555002 ERVS71-1P61550 626 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 TCEAL1Q15170 157 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 CMPK2Q5EBM0 449 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 CALHM1Q8IU99 346 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 OR8G5Q8NG78 346 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 NEURL4Q96JN8 1562 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM38AQ9H6F2 299 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 C1RLQ9NZP8 487 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 PSG6Q00889 435 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 FAM53AQ6NSI3 398 aaPredicted RBP6.13□□□□□ -1.43
SYNE2-216ENST00000555002 NHLRC1Q6VVB1 395 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 SSX8Q7RTT4 187 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 TRAV20A0A0B4J274 112 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 H0YIG0 161 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 RGS13O14921 159 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 COL8A1P27658 744 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 CD96P40200 585 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 MPLP40238 635 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 MMP15P51511 669 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 KHDC3LQ587J8 217 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 DHRS4L2Q6PKH6 230 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 WFDC5Q8TCV5 224 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 DDB2Q92466 427 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 RAXQ9Y2V3 346 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 A0A1B0GUH1 482 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 MDH2P40926 338 aaKnown RBP6.13□□□□□ -1.43
SYNE2-216ENST00000555002 PPICP45877 212 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 NXPH1P58417 271 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 PNLIPRP3Q17RR3 467 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 OR10J6PQ8NGY7 276 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 SMIM19Q96E16 107 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 MEGF10Q96KG7 1140 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 MRGPRX1Q96LB2 322 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 DHHO43323 396 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 MRPS11P82912 194 aaKnown RBP6.13□□□□□ -1.43
SYNE2-216ENST00000555002 FMODQ06828 376 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 GHITMQ9H3K2 345 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 MTCH2Q9Y6C9 303 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 C10orf113Q5VZT2 155 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 WDR89Q96FK6 387 aaPredicted RBP6.13□□□□□ -1.43
SYNE2-216ENST00000555002 ASB16Q96NS5 453 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 FOXB1Q99853 325 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 CYSLTR2Q9NS75 346 aa6.13□□□□□ -1.43
SYNE2-216ENST00000555002 RIF1Q5UIP0 2472 aaKnown RBP6.12□□□□□ -1.43
SYNE2-216ENST00000555002 MFSD2BA6NFX1 497 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 NPPBP16860 134 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 NUBP1P53384 320 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 SPINK14Q6IE38 97 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 F11RQ9Y624 299 aaKnown RBP6.12□□□□□ -1.43
SYNE2-216ENST00000555002 MBTPS2O43462 519 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 SRSF10O75494 262 aaKnown RBP6.12□□□□□ -1.43
SYNE2-216ENST00000555002 PRSS2P07478 247 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 RPS4XP62701 263 aaKnown RBP6.12□□□□□ -1.43
SYNE2-216ENST00000555002 STXBP6Q8NFX7 210 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 OR4D9Q8NGE8 314 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 OR10G4Q8NGN3 311 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 OR10G9Q8NGN4 311 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 OR10G7Q8NGN6 311 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 AVPR2P30518 371 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 GPR3P46089 330 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 CLLU1Q5K131 121 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 ZNF793Q6ZN11 406 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 PPP1R1CQ8WVI7 109 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 MCHR2Q969V1 340 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 TECRQ9NZ01 308 aaKnown RBP6.12□□□□□ -1.43
SYNE2-216ENST00000555002 JUNBP17275 347 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM128Q5BJH2 165 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 MEIG1Q5JSS6 88 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 CLEC2AQ6UVW9 174 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 OR4X1Q8NH49 305 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 CT55Q8WUE5 264 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM204Q9BSN7 226 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 VN1R1Q9GZP7 353 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 C4BP0C0L5 1744 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 IGHV3OR16-10A0A075B7F0 116 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM129A0AVI4 362 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 C7orf72A4D263 438 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 HLA-DRB5Q30154 266 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 PELI3Q8N2H9 469 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 OIT3Q8WWZ8 545 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 TEX37Q96LM6 180 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 HIGD1AQ9Y241 93 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 MYOM1P52179 1685 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 A0A1W2PPE3 182 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 LY6EQ16553 131 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 SLC25A35Q3KQZ1 300 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 OR4A47Q6IF82 309 aa6.12□□□□□ -1.43
SYNE2-216ENST00000555002 TMEM102Q8N9M5 508 aaPredicted RBP6.12□□□□□ -1.43
SYNE2-216ENST00000555002 RAX2Q96IS3 184 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms