RNA–Protein interactions for RNA: ENST00000554607.1

FOXA1-204, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 789 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-204ENST00000554607 FAM90A16PA6NEW6 464 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 FAM90A20PA6NIJ5 464 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 ZNF729A6NN14 1252 aaPredicted RBP19.17■□□□□ 0.66
FOXA1-204ENST00000554607 FAM90A9PA6NNJ1 464 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 FAM90A12PA8MX19 464 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 FAM90A5PA8MXJ8 464 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 RAMP3O60896 148 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 CSN2P05814 226 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 FAM90A15PP0C7V4 464 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 FAM90A13PP0C7W8 464 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 FAM90A14PP0C7W9 464 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 FAM90A24PP0C7X0 464 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 ATF1P18846 271 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 GP2P55259 537 aaKnown RBP19.17■□□□□ 0.66
FOXA1-204ENST00000554607 C12orf73Q69YU5 71 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 C8orf86Q6ZUL3 223 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 UTS2BQ765I0 119 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 PRSS35Q8N3Z0 413 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 COMMD1Q8N668 190 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 CHST4Q8NCG5 386 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 OR9G1Q8NH87 305 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 SPSB1Q96BD6 273 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 COMMD4Q9H0A8 199 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 RHOFQ9HBH0 211 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 KRT84Q9NSB2 600 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 AMMECR1Q9Y4X0 333 aaPredicted RBP19.17■□□□□ 0.66
FOXA1-204ENST00000554607 U3KQK5 164 aa19.17■□□□□ 0.66
FOXA1-204ENST00000554607 IGKV1-9A0A0C4DH69 117 aa19.16■□□□□ 0.66
FOXA1-204ENST00000554607 ZAR1LA6NP61 321 aa19.16■□□□□ 0.66
FOXA1-204ENST00000554607 GYS2P54840 703 aa19.16■□□□□ 0.66
FOXA1-204ENST00000554607 SLC35B1P78383 322 aa19.16■□□□□ 0.66
FOXA1-204ENST00000554607 FLOT2Q14254 428 aa19.16■□□□□ 0.66
FOXA1-204ENST00000554607 KRBOX4Q5JUW0 171 aa19.16■□□□□ 0.66
FOXA1-204ENST00000554607 TMEM244Q5VVB8 128 aa19.16■□□□□ 0.66
FOXA1-204ENST00000554607 TOMM40LQ969M1 308 aa19.16■□□□□ 0.66
FOXA1-204ENST00000554607 ADAT3Q96EY9 351 aaPredicted RBP19.16■□□□□ 0.66
FOXA1-204ENST00000554607 P2RX4Q99571 388 aa19.16■□□□□ 0.66
FOXA1-204ENST00000554607 OR6C3Q9NZP0 311 aa19.16■□□□□ 0.66
FOXA1-204ENST00000554607 OCM2P0CE71 109 aa19.15■□□□□ 0.66
FOXA1-204ENST00000554607 OCMP0CE72 109 aaPredicted RBP19.15■□□□□ 0.66
FOXA1-204ENST00000554607 ZNF44P15621 663 aa19.15■□□□□ 0.66
FOXA1-204ENST00000554607 ATP6V1E1P36543 226 aa19.15■□□□□ 0.66
FOXA1-204ENST00000554607 SCN1BQ07699 218 aa19.15■□□□□ 0.66
FOXA1-204ENST00000554607 FAM220AQ7Z4H9 259 aa19.15■□□□□ 0.66
FOXA1-204ENST00000554607 RDH10Q8IZV5 341 aa19.15■□□□□ 0.66
FOXA1-204ENST00000554607 KLHL30-AS1Q8NEE0 82 aa19.15■□□□□ 0.66
FOXA1-204ENST00000554607 OR10H4Q8NGA5 316 aa19.15■□□□□ 0.66
FOXA1-204ENST00000554607 OPALINQ96PE5 141 aa19.15■□□□□ 0.66
FOXA1-204ENST00000554607 TCRBV3S1A0A5B6 114 aa19.14■□□□□ 0.65
FOXA1-204ENST00000554607 SERPINE3A8MV23 424 aa19.14■□□□□ 0.65
FOXA1-204ENST00000554607 H0YHG0 523 aa19.14■□□□□ 0.65
FOXA1-204ENST00000554607 FGF16O43320 207 aa19.14■□□□□ 0.65
FOXA1-204ENST00000554607 KDM4BO94953 1096 aa19.14■□□□□ 0.65
FOXA1-204ENST00000554607 SNRNP70P08621 437 aaKnown RBP19.14■□□□□ 0.65
FOXA1-204ENST00000554607 ZNF20P17024 532 aa19.14■□□□□ 0.65
FOXA1-204ENST00000554607 NFYBP25208 207 aa19.14■□□□□ 0.65
FOXA1-204ENST00000554607 HTR1FP30939 366 aa19.14■□□□□ 0.65
FOXA1-204ENST00000554607 FGGYQ96C11 551 aa19.14■□□□□ 0.65
FOXA1-204ENST00000554607 NOL4LQ96MY1 436 aaPredicted RBP19.14■□□□□ 0.65
FOXA1-204ENST00000554607 ENOPH1Q9UHY7 261 aa19.14■□□□□ 0.65
FOXA1-204ENST00000554607 KBTBD11-OT1A0A1B0GTJ5 212 aa19.13■□□□□ 0.65
FOXA1-204ENST00000554607 MITFO75030 526 aaPredicted RBP19.13■□□□□ 0.65
FOXA1-204ENST00000554607 EPHA2P29317 976 aa19.13■□□□□ 0.65
FOXA1-204ENST00000554607 HES1Q14469 280 aa19.13■□□□□ 0.65
FOXA1-204ENST00000554607 C17orf58Q2M2W7 97 aa19.13■□□□□ 0.65
FOXA1-204ENST00000554607 ZNF695Q8IW36 515 aa19.13■□□□□ 0.65
FOXA1-204ENST00000554607 C5orf56Q8N8D9 126 aa19.13■□□□□ 0.65
FOXA1-204ENST00000554607 ZNF565Q8N9K5 539 aa19.13■□□□□ 0.65
FOXA1-204ENST00000554607 OR56B4Q8NH76 319 aa19.13■□□□□ 0.65
FOXA1-204ENST00000554607 TFAP2CQ92754 450 aa19.13■□□□□ 0.65
FOXA1-204ENST00000554607 COQ2Q96H96 371 aa19.13■□□□□ 0.65
FOXA1-204ENST00000554607 ING3Q9NXR8 418 aa19.13■□□□□ 0.65
FOXA1-204ENST00000554607 GNG8Q9UK08 70 aa19.13■□□□□ 0.65
FOXA1-204ENST00000554607 IGKV1-12A0A0C4DH73 117 aa19.12■□□□□ 0.65
FOXA1-204ENST00000554607 IGKV1D-12P01611 117 aa19.12■□□□□ 0.65
FOXA1-204ENST00000554607 TMEM11P17152 192 aa19.12■□□□□ 0.65
FOXA1-204ENST00000554607 KIR3DL2P43630 455 aa19.12■□□□□ 0.65
FOXA1-204ENST00000554607 BNIP1Q12981 228 aa19.12■□□□□ 0.65
FOXA1-204ENST00000554607 C18orf65Q6ZTR6 163 aa19.12■□□□□ 0.65
FOXA1-204ENST00000554607 FOXRED2Q8IWF2 684 aa19.12■□□□□ 0.65
FOXA1-204ENST00000554607 SAXO1Q8IYX7 474 aa19.12■□□□□ 0.65
FOXA1-204ENST00000554607 UTP4Q969X6 686 aaKnown RBP19.12■□□□□ 0.65
FOXA1-204ENST00000554607 RFT1Q96AA3 541 aa19.12■□□□□ 0.65
FOXA1-204ENST00000554607 KIRREL1Q96J84 757 aa19.12■□□□□ 0.65
FOXA1-204ENST00000554607 HRASLS5Q96KN8 279 aa19.12■□□□□ 0.65
FOXA1-204ENST00000554607 NEK6Q9HC98 313 aa19.12■□□□□ 0.65
FOXA1-204ENST00000554607 J3QR06 171 aa19.11■□□□□ 0.65
FOXA1-204ENST00000554607 SLC33A1O00400 549 aaPredicted RBP19.11■□□□□ 0.65
FOXA1-204ENST00000554607 DEGS1O15121 323 aa19.11■□□□□ 0.65
FOXA1-204ENST00000554607 ZFPL1O95159 310 aa19.11■□□□□ 0.65
FOXA1-204ENST00000554607 ISG15P05161 165 aa19.11■□□□□ 0.65
FOXA1-204ENST00000554607 ISL1P61371 349 aa19.11■□□□□ 0.65
FOXA1-204ENST00000554607 TMED1Q13445 227 aa19.11■□□□□ 0.65
FOXA1-204ENST00000554607 MADCAM1Q13477 382 aa19.11■□□□□ 0.65
FOXA1-204ENST00000554607 Q6P435 159 aa19.11■□□□□ 0.65
FOXA1-204ENST00000554607 SLC35E3Q7Z769 313 aa19.11■□□□□ 0.65
FOXA1-204ENST00000554607 DRAM1Q8N682 238 aa19.11■□□□□ 0.65
FOXA1-204ENST00000554607 CCDC197Q8NCU1 140 aa19.11■□□□□ 0.65
FOXA1-204ENST00000554607 G3V2T6 193 aa19.1■□□□□ 0.65
FOXA1-204ENST00000554607 APOL3O95236 402 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms