RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 PRSS48Q7RTY5 328 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 CALHM1Q8IU99 346 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 Q8N2B8 174 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 C11orf44Q8N8P7 122 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 POC1AQ8NBT0 407 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 TSPAN14Q8NG11 270 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 TMEM106AQ96A25 262 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 PGLYRP3Q96LB9 341 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 NPFFR1Q9GZQ6 430 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 HEXA-AS1Q9H8Q6 139 aa9.6□□□□□ -0.87
CKAP4-202ENST00000552828 PNMA8CA0A1B0GUJ8 204 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 FAM90A8PA6NJQ4 464 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 ZNF701M0R085 212 aaPredicted RBP9.59□□□□□ -0.87
CKAP4-202ENST00000552828 MAGEB3O15480 346 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 SULT1B1O43704 296 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 NXPH2O95156 264 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 CYB5AP00167 134 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 RAB3AP20336 220 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 GABRA2P47869 451 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 EMX1Q04741 257 aaPredicted RBP9.59□□□□□ -0.87
CKAP4-202ENST00000552828 SMIM21Q3B7S5 101 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 Q499Y3 187 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 ACP7Q6ZNF0 438 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 SLC25A26Q70HW3 274 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 MKXQ8IYA7 352 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 WIPF2Q8TF74 440 aaPredicted RBP9.59□□□□□ -0.87
CKAP4-202ENST00000552828 ZNF488Q96MN9 340 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 OR5M11Q96RB7 305 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 NRIP2Q9BQI9 281 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 ELL3Q9HB65 397 aaPredicted RBP9.59□□□□□ -0.87
CKAP4-202ENST00000552828 C19orf12Q9NSK7 152 aa9.59□□□□□ -0.87
CKAP4-202ENST00000552828 LSM2Q9Y333 95 aaKnown RBP9.59□□□□□ -0.87
CKAP4-202ENST00000552828 A0A087WXM4 84 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 TRBV5-5A0A0J9YX44 114 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 A0A1W2PPH5 198 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 HCKP08631 526 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 VSIG10L2P0DP72 767 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 POU3F4P49335 361 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 LOXL3P58215 753 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 GABARAPL2P60520 117 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 RPS11P62280 158 aaKnown RBP eCLIP9.58□□□□□ -0.88
CKAP4-202ENST00000552828 PPP3R1P63098 170 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 GPR50Q13585 617 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 TMEM200BQ69YZ2 307 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 FAM185AQ8N0U4 392 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 TMEM185AQ8NFB2 350 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 OR13C5Q8NGS8 318 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 THRSPQ92748 146 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 SLAMF9Q96A28 289 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 CPNE2Q96FN4 548 aaPredicted RBP9.58□□□□□ -0.88
CKAP4-202ENST00000552828 CEP19Q96LK0 163 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 ZNF702PQ9H963 129 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 SERTAD4Q9NUC0 356 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 NECAP2Q9NVZ3 263 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 TAS2R4Q9NYW5 299 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 MTCH1Q9NZJ7 389 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 CKLFQ9UBR5 152 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 PLXNB1O43157 2135 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 TENM3Q9P273 2699 aa9.58□□□□□ -0.88
CKAP4-202ENST00000552828 ADARB2-AS1A8MUL3 147 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 MRPS14O60783 128 aaKnown RBP9.57□□□□□ -0.88
CKAP4-202ENST00000552828 INMTO95050 263 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 HSMCR30P0CW71 290 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 PAX6P26367 422 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 MAP2K4P45985 399 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 BMXP51813 675 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 ERVK11-1P61568 191 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 RPL31P62899 125 aaKnown RBP9.57□□□□□ -0.88
CKAP4-202ENST00000552828 PDZK1IP1Q13113 114 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 DOC2BQ14184 412 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 KISS1Q15726 138 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 OXLD1Q5BKU9 147 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 ZNF529Q6P280 563 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 NDUFA11Q86Y39 141 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 Q8IYB0 196 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 BATF2Q8N1L9 274 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 ZNF561Q8N587 486 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 MS4A15Q8N5U1 240 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 CD177Q8N6Q3 437 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 OR4S1Q8NGB4 309 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 UFD1Q92890 307 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 RFT1Q96AA3 541 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 SPACA5Q96QH8 159 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 OR14A2Q96R54 314 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 HES4Q9HCC6 221 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 ISYNA1Q9NPH2 558 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 TMEM138Q9NPI0 162 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 CEPT1Q9Y6K0 416 aa9.57□□□□□ -0.88
CKAP4-202ENST00000552828 hCG_1809904A0A1W2PP81 198 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 A0A1W2PPE2 198 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 A0A1W2PR64 198 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 A0A1W2PRV1 198 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 RFPL4AA6NLU0 287 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 RFPL4AL1F8VTS6 287 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 FBXO24O75426 580 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 GPX5O75715 221 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 ALDOBP05062 364 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 TMEM225BP0DP42 221 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 CD28P10747 220 aa9.56□□□□□ -0.88
CKAP4-202ENST00000552828 MAPK3P27361 379 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms