RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 ATP6V1B2P21281 511 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 RRM2P31350 389 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 KIR3DL2P43630 455 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 RAB7AP51149 207 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 ZNF91Q05481 1191 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 KIAA0141Q14154 515 aaPredicted RBP9.23□□□□□ -0.93
PTCH1-222ENST00000551425 KPNB1Q14974 876 aaKnown RBP9.23□□□□□ -0.93
PTCH1-222ENST00000551425 UTF1Q5T230 341 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 C1orf146Q5VVC0 180 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 DEGS2Q6QHC5 323 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 AQP12AQ8IXF9 295 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 GHITMQ9H3K2 345 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 GNB4Q9HAV0 340 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 ZNF580Q9UK33 172 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 U3KQV3 271 aa9.23□□□□□ -0.93
PTCH1-222ENST00000551425 FUOMA2VDF0 154 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 MAGEA13PA6NCF6 341 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 H3BSH0 61 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 ALOX5APP20292 161 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 VDAC1P21796 283 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 PTGFRP43088 359 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 CDC42P60953 191 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 ISL1P61371 349 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 GNB1P62873 340 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 MADCAM1Q13477 382 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 ZNF146Q15072 292 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 FAM98BQ52LJ0 330 aaKnown RBP9.22□□□□□ -0.93
PTCH1-222ENST00000551425 ACSM6Q6P461 480 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 SPATA24Q86W54 205 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 Q8IYB0 196 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 Q8N6K4 173 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 ZNF491Q8N8L2 437 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 Q8N9W7 124 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 OR9Q2Q8NGE9 314 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 EMG1Q92979 244 aaKnown RBP9.22□□□□□ -0.93
PTCH1-222ENST00000551425 DLX4Q92988 240 aaPredicted RBP9.22□□□□□ -0.93
PTCH1-222ENST00000551425 UTP4Q969X6 686 aaKnown RBP9.22□□□□□ -0.93
PTCH1-222ENST00000551425 SLAMF9Q96A28 289 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 EME1Q96AY2 570 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 IL1RAPQ9NPH3 570 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 IL36RNQ9UBH0 155 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 NUFIP1Q9UHK0 495 aaKnown RBP9.22□□□□□ -0.93
PTCH1-222ENST00000551425 VSIG4Q9Y279 399 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 V9GYS6 101 aa9.22□□□□□ -0.93
PTCH1-222ENST00000551425 FAM230AA0A1W2PPH8 454 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 TCRBV5S2A0A599 114 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 DHRS7CA6NNS2 312 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 NCBP2LA6PVI3 153 aaKnown RBP9.21□□□□□ -0.94
PTCH1-222ENST00000551425 J3QR06 171 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 MPZL2O60487 215 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 LY6G6CO95867 125 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 GASTP01350 101 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 IGF1P05019 195 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 HOXB6P17509 224 aaKnown RBP9.21□□□□□ -0.94
PTCH1-222ENST00000551425 CNTFRP26992 372 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 DUSP1P28562 367 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 GLIPR1P48060 266 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 HMGA2P52926 109 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 DIAPH2-AS1Q14236 149 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 Q6ZSR3 168 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 C10orf67Q8IYJ2 551 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 GATAD1Q8WUU5 269 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 OTULINQ96BN8 352 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 EAF1Q96JC9 268 aaPredicted RBP9.21□□□□□ -0.94
PTCH1-222ENST00000551425 KCTD7Q96MP8 289 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 OR51V1Q9H2C8 321 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 OR51J1Q9H342 316 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 MAGIXQ9H6Y5 334 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 ARMC1Q9NVT9 282 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 V9GYQ6 96 aa9.21□□□□□ -0.94
PTCH1-222ENST00000551425 IGKV1-27A0A075B6S5 117 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 TCRBV3S1A0A5B6 114 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 ODAMA1E959 279 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 ZNF729A6NN14 1252 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-222ENST00000551425 HSPA12AO43301 675 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 ENTPD6O75354 484 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 E2F6O75461 281 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 KRT36O76013 467 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 SOX14O95416 240 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 TTRP02766 147 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 FABP3P05413 133 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 OR8U9P0C7N5 309 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 OR5H8P0DN80 308 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 AESQ08117 197 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 C17orf58Q2M2W7 97 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 ZNF829Q3KNS6 432 aaPredicted RBP9.2□□□□□ -0.94
PTCH1-222ENST00000551425 SPIN3Q5JUX0 258 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 SLC25A26Q70HW3 274 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 IZUMO1Q8IYV9 350 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 OR14K1Q8NGZ2 314 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 HAVCR2Q8TDQ0 301 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 KIRREL1Q96J84 757 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 CHCHD6Q9BRQ6 235 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 MROQ9BYG7 248 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 KLK15Q9H2R5 256 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 PLSCR3Q9NRY6 295 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 LAMP5Q9UJQ1 280 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 HECTD4Q9Y4D8 3996 aa9.2□□□□□ -0.94
PTCH1-222ENST00000551425 TRBV2A0A0J9YWF9 115 aa9.19□□□□□ -0.94
PTCH1-222ENST00000551425 A0A1B0GTI1 187 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms