RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 BCL7BQ9BQE9 202 aa17.77■□□□□ 0.44
NEK3-202ENST00000550841 NUDT16L1Q9BRJ7 211 aaKnown RBP17.77■□□□□ 0.44
NEK3-202ENST00000550841 DCTN5Q9BTE1 182 aa17.77■□□□□ 0.44
NEK3-202ENST00000550841 MRI1Q9BV20 369 aa17.77■□□□□ 0.44
NEK3-202ENST00000550841 RAB22AQ9UL26 194 aa17.77■□□□□ 0.44
NEK3-202ENST00000550841 IGHV2-70DA0A0C4DH43 119 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 A8MV72 311 aaPredicted RBP17.76■□□□□ 0.43
NEK3-202ENST00000550841 SLC33A1O00400 549 aaPredicted RBP17.76■□□□□ 0.43
NEK3-202ENST00000550841 GEMIN2O14893 280 aaKnown RBP17.76■□□□□ 0.43
NEK3-202ENST00000550841 NOL3O60936 208 aaKnown RBP17.76■□□□□ 0.43
NEK3-202ENST00000550841 CLEC2LP0C7M8 214 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 KCNJ3P48549 501 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 SERPINB10P48595 397 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 TMBIM6P55061 237 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 CLDN12P56749 244 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 VBP1P61758 197 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 PDCD1Q15116 288 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 GRK1Q15835 563 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 NR2C2APQ86WQ0 139 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 CLVS1Q8IUQ0 354 aaPredicted RBP17.76■□□□□ 0.43
NEK3-202ENST00000550841 RAB2BQ8WUD1 216 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 Q96M66 194 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 SHARPINQ9H0F6 387 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 LIN7BQ9HAP6 207 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 DAPK2Q9UIK4 370 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 RPUSD1Q9UJJ7 312 aaKnown RBP17.76■□□□□ 0.43
NEK3-202ENST00000550841 INSIG2Q9Y5U4 225 aa17.76■□□□□ 0.43
NEK3-202ENST00000550841 A0A1W2PPH5 198 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 SMIM30A4D0T7 59 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 PSPNO60542 156 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 FCN3O75636 299 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 RPS19P39019 145 aaKnown RBP17.75■□□□□ 0.43
NEK3-202ENST00000550841 NCS1P62166 190 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 RPS27AP62979 156 aaKnown RBP17.75■□□□□ 0.43
NEK3-202ENST00000550841 PAX2Q02962 417 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 CTF1Q16619 201 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 PAN3Q58A45 887 aaKnown RBP17.75■□□□□ 0.43
NEK3-202ENST00000550841 ATAD3CQ5T2N8 411 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 OR10K2Q6IF99 312 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 FAHD2BQ6P2I3 314 aaPredicted RBP17.75■□□□□ 0.43
NEK3-202ENST00000550841 LY6G5BQ8NDX9 201 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 C8orf46Q8TAG6 207 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 PTX4Q96A99 478 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 FAHD2AQ96GK7 314 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 TM2D1Q9BX74 207 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 NAA50Q9GZZ1 169 aaKnown RBP17.75■□□□□ 0.43
NEK3-202ENST00000550841 MMP26Q9NRE1 261 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 LPAR3Q9UBY5 353 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 NIPBLQ6KC79 2804 aaeCLIP17.75■□□□□ 0.43
NEK3-202ENST00000550841 ARHGAP32A7KAX9 2087 aa17.75■□□□□ 0.43
NEK3-202ENST00000550841 TRAV24A0A0B4J272 114 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 C22orf46C9J442 243 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 CSN2P05814 226 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 GLAP06280 429 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 PPIAL4GP0DN37 164 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 SLC2A2P11168 524 aaPredicted RBP17.74■□□□□ 0.43
NEK3-202ENST00000550841 FUT3P21217 361 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 ERP29P30040 261 aaKnown RBP17.74■□□□□ 0.43
NEK3-202ENST00000550841 TGFBR1P36897 503 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 SCAND1P57086 179 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 RPL31P62899 125 aaKnown RBP17.74■□□□□ 0.43
NEK3-202ENST00000550841 UNC119Q13432 240 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 RBM39Q14498 530 aaKnown RBP17.74■□□□□ 0.43
NEK3-202ENST00000550841 USP43Q70EL4 1123 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 FGFRL1Q8N441 504 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 TEX29Q8N6K0 151 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 OR4S1Q8NGB4 309 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 BARHL1Q9BZE3 327 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 CHST6Q9GZX3 395 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 TMEM160Q9NX00 188 aa17.74■□□□□ 0.43
NEK3-202ENST00000550841 WNK2Q9Y3S1 2297 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 NAV3Q8IVL0 2385 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 A0A1W2PQ09 198 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 MCRIP1C9JLW8 97 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 LDLRAD4O15165 306 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 RAB6AP20340 208 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 OR3A1P47881 315 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 EDDM3BP56851 147 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 MEF2CQ06413 473 aaPredicted RBP17.73■□□□□ 0.43
NEK3-202ENST00000550841 PAX8Q06710 450 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 IDNKQ5T6J7 187 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 SUMF2Q8NBJ7 301 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 DACT3Q96B18 629 aaPredicted RBP17.73■□□□□ 0.43
NEK3-202ENST00000550841 NEDD4LQ96PU5 975 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 DPCDQ9BVM2 203 aaPredicted RBP17.73■□□□□ 0.43
NEK3-202ENST00000550841 PPA2Q9H2U2 334 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 C7orf69Q9H7B7 122 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 ABCA2Q9BZC7 2435 aa17.73■□□□□ 0.43
NEK3-202ENST00000550841 TMEM272A0A1B0GTI8 110 aa17.72■□□□□ 0.43
NEK3-202ENST00000550841 hADV38S2A0JD32 116 aa17.72■□□□□ 0.43
NEK3-202ENST00000550841 METTL21EPA6NDL7 271 aa17.72■□□□□ 0.43
NEK3-202ENST00000550841 CMTM4Q8IZR5 234 aa17.72■□□□□ 0.43
NEK3-202ENST00000550841 SLC25A46Q96AG3 418 aa17.72■□□□□ 0.43
NEK3-202ENST00000550841 NCOR1P1Q9H4R4 102 aa17.72■□□□□ 0.43
NEK3-202ENST00000550841 ABRACLQ9P1F3 81 aa17.72■□□□□ 0.43
NEK3-202ENST00000550841 PEX16Q9Y5Y5 336 aa17.72■□□□□ 0.43
NEK3-202ENST00000550841 PDCD6O75340 191 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 RORCP51449 518 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 BLMHQ13867 455 aa17.71■□□□□ 0.43
NEK3-202ENST00000550841 EDDM3AQ14507 147 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms