RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 IGKV1-9A0A0C4DH69 117 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 LOC107986453A0A1B0GWG9 222 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 A0A1B0GX30 115 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 LEUTXA8MZ59 168 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 H3BSH0 61 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 SH2D1BO14796 132 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 ENTPD6O75354 484 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 KDM4BO94953 1096 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 OR2F2O95006 317 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 INMTO95050 263 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 PF4P02776 101 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 CSN2P05814 226 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 PRKACAP17612 351 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 ATF1P18846 271 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 PRKACBP22694 351 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 CDK2P24941 298 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 LMO1P25800 156 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 DUSP1P28562 367 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 ADMP35318 185 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 ATP6V1E1P36543 226 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 CEACAM3P40198 252 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 KIR3DL2P43630 455 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 NPBWR2P48146 333 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 POU3F4P49335 361 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 MTCP1P56278 107 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 TCTEX1D4Q5JR98 221 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 PRAMEF5Q5TYX0 476 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 TMEM244Q5VVB8 128 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 CCDC144NLQ6NUI1 221 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 UTS2BQ765I0 119 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 OR8J1Q8NGP2 316 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 STMN2Q93045 179 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 SLC7A6OSQ96CW6 309 aaPredicted RBP6.08□□□□□ -1.44
NEK3-201ENST00000550331 ADAT3Q96EY9 351 aaPredicted RBP6.08□□□□□ -1.44
NEK3-201ENST00000550331 RCC1LQ96I51 464 aaKnown RBP6.08□□□□□ -1.44
NEK3-201ENST00000550331 OPALINQ96PE5 141 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 RBM14Q96PK6 669 aaKnown RBP6.08□□□□□ -1.44
NEK3-201ENST00000550331 MBOAT4Q96T53 435 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 CIB1Q99828 191 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 SLC25A33Q9BSK2 321 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 GABARAPL3Q9BY60 117 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 RHOFQ9HBH0 211 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 HMG20AQ9NP66 347 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 EXOSC4Q9NPD3 245 aaKnown RBP6.08□□□□□ -1.44
NEK3-201ENST00000550331 GNG8Q9UK08 70 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 PCDHGB5Q9Y5G0 923 aa6.08□□□□□ -1.44
NEK3-201ENST00000550331 TSSC4Q9Y5U2 329 aaPredicted RBP6.08□□□□□ -1.44
NEK3-201ENST00000550331 A0A1W2PRX2 142 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 TCRBV4S1A1TA0A5B7 111 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 OOSP1A8MZH6 123 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 M0QZK8 103 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 SIRPB1O00241 398 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 MMP23AO75900 390 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 APOL3O95236 402 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 CLIC3O95833 236 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 OR2H2O95918 312 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 MT-ND2P03891 347 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 AMY1AP04745 511 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 AMY2AP04746 511 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 LPLP06858 475 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 FCGR1AP12314 374 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 ZNF20P17024 532 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 FASP25445 335 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 MNDAP41218 407 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 PTGFRP43088 359 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 CCR9P51686 369 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 ZNF85Q03923 595 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 PDZK1IP1Q13113 114 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 HLA-DRB5Q30154 266 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 ABCA11PQ4W5N1 156 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 TPTE2P1Q5T6R2 138 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 CCDC121Q6ZUS5 278 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 KCTD20Q7Z5Y7 419 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 SAXO1Q8IYX7 474 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 RDH10Q8IZV5 341 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 OSR2Q8N2R0 312 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 CHST4Q8NCG5 386 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 OR2G2Q8NGZ5 317 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 MYDGFQ969H8 173 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 EME1Q96AY2 570 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 MISP3Q96FF7 219 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 OSBPL10Q9BXB5 764 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 GPR61Q9BZJ8 451 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 COMMD4Q9H0A8 199 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 PCDHB16Q9NRJ7 776 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 HHLA2Q9UM44 414 aa6.07□□□□□ -1.44
NEK3-201ENST00000550331 IGKV1-12A0A0C4DH73 117 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 ODAMA1E959 279 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 ZNF729A6NN14 1252 aaPredicted RBP6.06□□□□□ -1.44
NEK3-201ENST00000550331 LY6LH3BQJ8 138 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 BUB1B-PAK6H3BSN5 160 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 K7EIL1 84 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 TOR1AO14656 332 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 SLC16A6O15403 523 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 IGKV1D-12P01611 117 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 OCM2P0CE71 109 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 OCMP0CE72 109 aaPredicted RBP6.06□□□□□ -1.44
NEK3-201ENST00000550331 FAM106CPP0CH98 169 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 CALCBP10092 127 aa6.06□□□□□ -1.44
NEK3-201ENST00000550331 CD24P25063 80 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms