RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 CYGBQ8WWM9 190 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 OPALINQ96PE5 141 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 SPACA5Q96QH8 159 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 C8orf4Q9NR00 106 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 RBFOX1Q9NWB1 397 aaKnown RBP9.78□□□□□ -0.84
DDX54-206ENST00000549271 PITPNC1Q9UKF7 332 aa9.78□□□□□ -0.84
DDX54-206ENST00000549271 A0A1W2PRX2 142 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 TMEM212A6NML5 194 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 CASQ2O14958 399 aaPredicted RBP9.77□□□□□ -0.85
DDX54-206ENST00000549271 CALCBP10092 127 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 PF4V1P10720 104 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 COX7A1P24310 79 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 DCKP27707 260 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 DUSP1P28562 367 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 POU3F4P49335 361 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 OGFRL1Q5TC84 451 aaPredicted RBP9.77□□□□□ -0.85
DDX54-206ENST00000549271 ZNF626Q68DY1 528 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 XAF1Q6GPH4 301 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 LAIR2Q6ISS4 152 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 LHFPL4Q7Z7J7 247 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 Q8IYB0 196 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 FAM58AQ8N1B3 248 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 DYNAPQ8N1N2 210 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 PARP16Q8N5Y8 322 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 OR52N4Q8NGI2 321 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 OR13C9Q8NGT0 318 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 OR13D1Q8NGV5 346 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 OR5AK2Q8NH90 309 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 RPS4Y2Q8TD47 263 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 RGP1Q92546 391 aaPredicted RBP9.77□□□□□ -0.85
DDX54-206ENST00000549271 EMG1Q92979 244 aaKnown RBP9.77□□□□□ -0.85
DDX54-206ENST00000549271 RFT1Q96AA3 541 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 SPSB1Q96BD6 273 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 SNX22Q96L94 193 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 ZCCHC4Q9H5U6 513 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 CLEC2DQ9UHP7 191 aa9.77□□□□□ -0.85
DDX54-206ENST00000549271 SIRT4Q9Y6E7 314 aaPredicted RBP9.77□□□□□ -0.85
DDX54-206ENST00000549271 TRBV2A0A0J9YWF9 115 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 HAND1O96004 215 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 PF4P02776 101 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 GNAO1P09471 354 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 CCDC159P0C7I6 412 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 ZNF728P0DKX0 622 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 PIPP12273 146 aaPredicted RBP9.76□□□□□ -0.85
DDX54-206ENST00000549271 MEF2CQ06413 473 aaPredicted RBP9.76□□□□□ -0.85
DDX54-206ENST00000549271 ZNF146Q15072 292 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 LDLRAD2Q5SZI1 272 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 OR2G6Q5TZ20 316 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 ZNF529Q6P280 563 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 ZNF782Q6ZMW2 699 aaPredicted RBP9.76□□□□□ -0.85
DDX54-206ENST00000549271 SERPINA12Q8IW75 414 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 ASCC1Q8N9N2 400 aaKnown RBP9.76□□□□□ -0.85
DDX54-206ENST00000549271 ZNF485Q8NCK3 441 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 GGHQ92820 318 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 NKX3-1Q99801 234 aaPredicted RBP9.76□□□□□ -0.85
DDX54-206ENST00000549271 PRSS22Q9GZN4 317 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 HMG20AQ9NP66 347 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 DIMT1Q9UNQ2 313 aaKnown RBP9.76□□□□□ -0.85
DDX54-206ENST00000549271 HERC2O95714 4834 aa9.76□□□□□ -0.85
DDX54-206ENST00000549271 MEX3AA1L020 520 aaKnown RBP9.75□□□□□ -0.85
DDX54-206ENST00000549271 OGG1O15527 345 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 PSPNO60542 156 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 KDM4BO94953 1096 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 LALBAP00709 142 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 RPSAP08865 295 aaKnown RBP9.75□□□□□ -0.85
DDX54-206ENST00000549271 IGHV1-8P0DP01 117 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 PRKACAP17612 351 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 LMO1P25800 156 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 RAB13P51153 203 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 ZP1P60852 638 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 IL18R1Q13478 541 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 CDK5R1Q15078 307 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 CCDC58Q4VC31 144 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 MINOS1Q5TGZ0 78 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 RPL22L1Q6P5R6 122 aaKnown RBP9.75□□□□□ -0.85
DDX54-206ENST00000549271 TCF23Q7RTU1 214 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 SAXO1Q8IYX7 474 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 OR8H2Q8N162 312 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 SETD9Q8NE22 299 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 OR5D18Q8NGL1 313 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 OR5D14Q8NGL3 314 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 HAVCR2Q8TDQ0 301 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 FBLIM1Q8WUP2 373 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 GPR61Q9BZJ8 451 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 COMMD4Q9H0A8 199 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 ABCB10Q9NRK6 738 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 BABAM2Q9NXR7 383 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 NKX1-2Q9UD57 310 aaPredicted RBP9.75□□□□□ -0.85
DDX54-206ENST00000549271 DHDHQ9UQ10 334 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 MINOS1-NBL1R4GNA1 71 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 HSPE1-MOB4S4R3N1 261 aa9.75□□□□□ -0.85
DDX54-206ENST00000549271 IRGMA1A4Y4 181 aa9.74□□□□□ -0.85
DDX54-206ENST00000549271 FAM90A22PA8MWA6 464 aa9.74□□□□□ -0.85
DDX54-206ENST00000549271 SULT1B1O43704 296 aa9.74□□□□□ -0.85
DDX54-206ENST00000549271 CYB5AP00167 134 aa9.74□□□□□ -0.85
DDX54-206ENST00000549271 ALDOBP05062 364 aa9.74□□□□□ -0.85
DDX54-206ENST00000549271 ARG1P05089 322 aa9.74□□□□□ -0.85
DDX54-206ENST00000549271 CAPGP40121 348 aa9.74□□□□□ -0.85
DDX54-206ENST00000549271 SNU13P55769 128 aaKnown RBP9.74□□□□□ -0.85
DDX54-206ENST00000549271 ST3GAL4Q11206 333 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms