RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 HACD4Q5VWC8 232 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 MOB1BQ7L9L4 216 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 ZNF554Q86TJ5 538 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 OR8H2Q8N162 312 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 GAPTQ8N292 157 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 BOLLQ8N9W6 283 aaKnown RBP13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 C10orf105Q8TEF2 133 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 DEDD2Q8WXF8 326 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 ARHGAP5-AS1Q96IT6 56 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 TMEM246Q9BRR3 403 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 DPCDQ9BVM2 203 aaPredicted RBP13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 CHST6Q9GZX3 395 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 LPAR3Q9UBY5 353 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 V9GYH0 126 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 CCDC168Q8NDH2 2452 aa13.38□□□□□ -0.27
PRPF40A-212ENST00000545856 TRAV18A0A075B6X5 111 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 TRBV6-6A0A0A6YYG2 114 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 NDUFS7O75251 213 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 HEXAP06865 529 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 IL18Q14116 193 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 LRRC10Q5BKY1 277 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 FAM131AQ6UXB0 335 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 BIVMQ86UB2 503 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 TGIF2LYQ8IUE0 185 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 ZNF525Q8N782 197 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 SUMF2Q8NBJ7 301 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 GAFA1Q96PS6 74 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 PECRQ9BY49 303 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 C12orf4Q9NQ89 552 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 DCAF16Q9NXF7 216 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 IL36RNQ9UBH0 155 aa13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 ZNF107Q9UII5 783 aaPredicted RBP13.37□□□□□ -0.27
PRPF40A-212ENST00000545856 VWC2LB2RUY7 222 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 GABARAPH6UMI1 98 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 GSTZ1O43708 216 aaPredicted RBP13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 HLA-DQB1P01920 261 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 INHBBP09529 407 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 DTYMKP23919 212 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 PRSS3P35030 304 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 GABRA2P47869 451 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 COL10A1Q03692 680 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 MOGAT2Q3SYC2 334 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 CDNFQ49AH0 187 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 PLAC9Q5JTB6 97 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 NKAPLQ5M9Q1 402 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 SFRP4Q6FHJ7 346 aaPredicted RBP13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 TRAT1Q6PIZ9 186 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 Q6ZS49 121 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 MFSD4AQ8N468 514 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 CD177Q8N6Q3 437 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 OR8B3Q8NGG8 313 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 RAB39BQ96DA2 213 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 NEIL1Q96FI4 390 aaPredicted RBP13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 PERPQ96FX8 193 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 OR8B2Q96RD0 313 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 FOXC2Q99958 501 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 CCDC32Q9BV29 185 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 RAB9BQ9NP90 201 aa13.36□□□□□ -0.27
PRPF40A-212ENST00000545856 TRBV23-1A0A0A0MS06 115 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 ISPDA4D126 451 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 CEACAM18A8MTB9 384 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 F5H0A9 414 aaPredicted RBP13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 LYNX1G3V0Z9 82 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 SIRPB1O00241 398 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 TMPRSS2O15393 492 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 ADAM20O43506 726 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 NDUFB3O43676 98 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 LY6HO94772 140 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 ECDO95905 644 aaPredicted RBP13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 GYPAP02724 150 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 TK1P04183 234 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 LPLP06858 475 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 CD3GP09693 182 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 LYNX1P0DP58 116 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 DUSP1P28562 367 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 GNG2P59768 71 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 ACTBP60709 375 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 GMFBP60983 142 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 ACTG1P63261 375 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 FAM201AQ5SY85 155 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 SLC35E4Q6ICL7 350 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 C17orf107Q6ZR85 190 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 C6orf201Q7Z4U5 140 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 BATF2Q8N1L9 274 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 ASCC1Q8N9N2 400 aaKnown RBP13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 DEFB108BQ8NET1 73 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 SMIM4Q8WVI0 70 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 PATZ1Q9HBE1 687 aaKnown RBP13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 ETAA1Q9NY74 926 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 OPN4Q9UHM6 478 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 MAB21L2Q9Y586 359 aa13.35□□□□□ -0.27
PRPF40A-212ENST00000545856 PRRC2AP48634 2157 aaKnown RBP13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 IGHV3OR15-7A0A075B7D8 119 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 TMEM30CPA0ZSE6 113 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 DIRAS3O95661 229 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 NAPSAO96009 420 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 RPS2P15880 293 aaKnown RBP13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 OR3A1P47881 315 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 PPP5CP53041 499 aa13.34□□□□□ -0.27
PRPF40A-212ENST00000545856 SNU13P55769 128 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms