RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ZNF528Q3MIS6 628 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 SP6Q3SY56 376 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 ZNF660Q6AZW8 331 aaPredicted RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 DEFB123Q8N688 67 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 APCDD1LQ8NCL9 501 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 LHX4Q969G2 390 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 CLDN23Q96B33 292 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 MRPS24Q96EL2 167 aaKnown RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 FAM103A1Q9BTL3 118 aaKnown RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 GEMIN2O14893 280 aaKnown RBP5.06□□□□□ -1.6
VPS50-220ENST00000544910 TIAF1O95411 115 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 NMBP08949 121 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 PATE4P0C8F1 98 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 MDH2P40926 338 aaKnown RBP5.06□□□□□ -1.6
VPS50-220ENST00000544910 KRTDAPP60985 99 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 PPP1CBP62140 327 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 FOXO1Q12778 655 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 SLC25A53Q5H9E4 307 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 TMEM123Q8N131 208 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 SLC25A28Q96A46 364 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 PACRGQ96M98 296 aaPredicted RBP5.06□□□□□ -1.6
VPS50-220ENST00000544910 TRIB1Q96RU8 372 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 CDX2Q99626 313 aaPredicted RBP5.06□□□□□ -1.6
VPS50-220ENST00000544910 GPR87Q9BY21 358 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 CACFD1Q9UGQ2 172 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 TRAPPC1Q9Y5R8 145 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 ARL2-SNX15V9GYD0 113 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 PLXND1Q9Y4D7 1925 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 IGKV1D-43A0A0B4J1Z2 117 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 GLI4P10075 376 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 P2RY1P47900 373 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 SULT1A2P50226 295 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 DMWDQ09019 674 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 PCOLCEQ15113 449 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 C21orf62-AS1Q17RA5 79 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 RTN4RQ9BZR6 473 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 GPR27Q9NS67 375 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 PLA2G3Q9NZ20 509 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 PILRBQ9UKJ0 227 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 CCDC88CQ9P219 2028 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 PQLC2LA1A4F0 135 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 COX5AP20674 150 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 USF1P22415 310 aaPredicted RBP5.06□□□□□ -1.6
VPS50-220ENST00000544910 MST1P26927 711 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 TIGITQ495A1 244 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 SPINK14Q6IE38 97 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 RDH5Q92781 318 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 SPOCK3Q9BQ16 436 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 FBXL17Q9UF56 701 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 A0A1W2PQM1 296 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 TMEM14DPA8MWL7 114 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 MFNGO00587 321 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 CD8AP01732 235 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 TNFSF4P23510 183 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 OR10J1P30954 320 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 FAM27BQ5VT28 67 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 NECAP1Q8NC96 275 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 SHARPINQ9H0F6 387 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 MYOZ1Q9NP98 299 aaPredicted RBP5.06□□□□□ -1.6
VPS50-220ENST00000544910 PIPOXQ9P0Z9 390 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 GPR160Q9UJ42 338 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 WSB1Q9Y6I7 421 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 H3BMH7 237 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 K7ERU9 68 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 ADAM20O43506 726 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 ONECUT2O95948 504 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 NTF3P20783 257 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 AKR1C3P42330 323 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 CLN3Q13286 438 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 PIGYQ3MUY2 71 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 C10orf128Q5T292 105 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 RPL7L1Q6DKI1 246 aaKnown RBP5.06□□□□□ -1.6
VPS50-220ENST00000544910 TMEM104Q8NE00 496 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 NFAM1Q8NET5 270 aaPredicted RBP5.06□□□□□ -1.6
VPS50-220ENST00000544910 DMBX1Q8NFW5 382 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 OR4A16Q8NH70 328 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 LPAR3Q9UBY5 353 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 PITPNC1Q9UKF7 332 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 GPR132Q9UNW8 380 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 COL4A3Q01955 1670 aa5.06□□□□□ -1.6
VPS50-220ENST00000544910 LNP1A1A4G5 178 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 UNC119Q13432 240 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 FADS6Q8N9I5 356 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 MEGF10Q96KG7 1140 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 C1QTNF6Q9BXI9 259 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 SRXN1Q9BYN0 137 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 SLC26A1Q9H2B4 701 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 SMDT1Q9H4I9 107 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 ESRP2Q9H6T0 727 aaKnown RBP5.05□□□□□ -1.6
VPS50-220ENST00000544910 GOLT1BQ9Y3E0 138 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 DMRT1Q9Y5R6 373 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 A0A0J9YW62 118 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 B4E171 279 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 SPINT2O43291 252 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 OR8U8P0C7N1 319 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 CCL2P13500 99 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 MPGP29372 298 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 TSPAN7P41732 249 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 NPBWR1P48145 328 aa5.05□□□□□ -1.6
VPS50-220ENST00000544910 PMS2P11Q13670 270 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms