RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 TRAPPC6AO75865 159 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 CSTBP04080 98 aaKnown RBP13.01□□□□□ -0.33
CHFR-223ENST00000544268 SERPINA2P20848 420 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 FKBP2P26885 142 aaKnown RBP13.01□□□□□ -0.33
CHFR-223ENST00000544268 ID4P47928 161 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 SNAI3Q3KNW1 292 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 RPL7L1Q6DKI1 246 aaKnown RBP13.01□□□□□ -0.33
CHFR-223ENST00000544268 OR2M7Q8NG81 312 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 OR2AE1Q8NHA4 323 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 TMEM59Q9BXS4 323 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 SRXN1Q9BYN0 137 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 OR5AC2Q9NZP5 309 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 TMED3Q9Y3Q3 217 aa13.01□□□□□ -0.33
CHFR-223ENST00000544268 MKRN2OSH3BPM6 223 aa13□□□□□ -0.33
CHFR-223ENST00000544268 OR2C1O95371 312 aa13□□□□□ -0.33
CHFR-223ENST00000544268 IFNA6P05013 189 aa13□□□□□ -0.33
CHFR-223ENST00000544268 GDF1P27539 372 aa13□□□□□ -0.33
CHFR-223ENST00000544268 SNCAP37840 140 aa13□□□□□ -0.33
CHFR-223ENST00000544268 RRADP55042 308 aa13□□□□□ -0.33
CHFR-223ENST00000544268 CARD18P57730 90 aa13□□□□□ -0.33
CHFR-223ENST00000544268 H3F3AP84243 136 aa13□□□□□ -0.33
CHFR-223ENST00000544268 SULF2Q8IWU5 870 aa13□□□□□ -0.33
CHFR-223ENST00000544268 TMEM230Q96A57 120 aa13□□□□□ -0.33
CHFR-223ENST00000544268 PGAM5Q96HS1 289 aa13□□□□□ -0.33
CHFR-223ENST00000544268 FAM173AQ9BQD7 235 aa13□□□□□ -0.33
CHFR-223ENST00000544268 HDHD3Q9BSH5 251 aaPredicted RBP13□□□□□ -0.33
CHFR-223ENST00000544268 SCRT1Q9BWW7 348 aa13□□□□□ -0.33
CHFR-223ENST00000544268 PRO1933Q9H354 126 aa13□□□□□ -0.33
CHFR-223ENST00000544268 C5orf66Q9H5L9 145 aa13□□□□□ -0.33
CHFR-223ENST00000544268 PLA2G2EQ9NZK7 142 aa13□□□□□ -0.33
CHFR-223ENST00000544268 ZDHHC8Q9ULC8 765 aa13□□□□□ -0.33
CHFR-223ENST00000544268 URB1O60287 2271 aaKnown RBP13□□□□□ -0.33
CHFR-223ENST00000544268 IGKV1D-8A0A087WSZ0 117 aa13□□□□□ -0.33
CHFR-223ENST00000544268 A0A0J9YW62 118 aa13□□□□□ -0.33
CHFR-223ENST00000544268 UMAD1C9J7I0 102 aa13□□□□□ -0.33
CHFR-223ENST00000544268 TSPAN15O95858 294 aa13□□□□□ -0.33
CHFR-223ENST00000544268 HIST1H1DP16402 221 aaKnown RBP13□□□□□ -0.33
CHFR-223ENST00000544268 KISS1Q15726 138 aa13□□□□□ -0.33
CHFR-223ENST00000544268 GUK1Q16774 197 aa13□□□□□ -0.33
CHFR-223ENST00000544268 WIPI1Q5MNZ9 446 aaPredicted RBP13□□□□□ -0.33
CHFR-223ENST00000544268 OR2A2Q6IF42 318 aa13□□□□□ -0.33
CHFR-223ENST00000544268 NABP1Q96AH0 204 aa13□□□□□ -0.33
CHFR-223ENST00000544268 GALNT14Q96FL9 552 aa13□□□□□ -0.33
CHFR-223ENST00000544268 BOKQ9UMX3 212 aaPredicted RBP13□□□□□ -0.33
CHFR-223ENST00000544268 ELOA3CA0A087WX78 387 aaPredicted RBP12.99□□□□□ -0.33
CHFR-223ENST00000544268 CST4P01036 141 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 CSNK1A1P48729 337 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 UCP2P55851 309 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 RPS23P62266 143 aaKnown RBP12.99□□□□□ -0.33
CHFR-223ENST00000544268 TMEM268Q5VZI3 342 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 ZNF610Q8N9Z0 462 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 ELL3Q9HB65 397 aaPredicted RBP12.99□□□□□ -0.33
CHFR-223ENST00000544268 SOX8P57073 446 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 TAS2R31P59538 309 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 SLC35A1P78382 337 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 ZIC4Q8N9L1 334 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 ADPRHL1Q8NDY3 354 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 OR51T1Q8NGJ9 327 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 RAB24Q969Q5 203 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 ZNF552Q9H707 407 aaPredicted RBP12.99□□□□□ -0.33
CHFR-223ENST00000544268 KCNIP3Q9Y2W7 256 aa12.99□□□□□ -0.33
CHFR-223ENST00000544268 PPP1R2P9O14990 202 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 CCL11P51671 97 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 ARFRP1Q13795 201 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 GALNTL5Q7Z4T8 443 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 HOGA1Q86XE5 327 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 BATF2Q8N1L9 274 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 HIST3H2BBQ8N257 126 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 MDS2Q8NDY4 140 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 SSC4DQ8WTU2 575 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 RAB18Q9NP72 206 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 ZNF587BE7ETH6 402 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 MSTNO14793 375 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 ANGPTL7O43827 346 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 SP1P08047 785 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 FCGR2AP12318 317 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 GLRA1P23415 457 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 NHLH2Q02577 135 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 USF2Q15853 346 aaPredicted RBP12.98□□□□□ -0.33
CHFR-223ENST00000544268 HIST2H3PS2Q5TEC6 136 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 BRICD5Q6PL45 260 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 OR13G1Q8NGZ3 307 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 ZNF703Q9H7S9 590 aaPredicted RBP12.98□□□□□ -0.33
CHFR-223ENST00000544268 PIGLQ9Y2B2 252 aa12.98□□□□□ -0.33
CHFR-223ENST00000544268 HPNP05981 417 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 CELA3AP09093 270 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 PET100P0DJ07 73 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 SPINK2P20155 84 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 MSR1P21757 451 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 ZNF84P51523 738 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 SUPT4H1P63272 117 aaKnown RBP12.97□□□□□ -0.33
CHFR-223ENST00000544268 KHDC3LQ587J8 217 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 SPNS3Q6ZMD2 512 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 DOK3Q7L591 496 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 C6orf201Q7Z4U5 140 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 TMEM123Q8N131 208 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 OR9K2Q8NGE7 335 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 OR5R1Q8NH85 324 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 KCNG3Q8TAE7 436 aa12.97□□□□□ -0.33
CHFR-223ENST00000544268 CD300LFQ8TDQ1 290 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms