RNA–Protein interactions for RNA: ENST00000544246.5

PCDH9-204, Transcript of protocadherin 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH9, Length 6,234 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-204ENST00000544246 VN1R17PQ8TDU5 208 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 SNX22Q96L94 193 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 NPIPB6E9PJ23 425 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 PRKNO60260 465 aaPredicted RBP9.24□□□□□ -0.93
PCDH9-204ENST00000544246 FAM157CP0CG43 387 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 PGA4P0DJD7 388 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 PGA5P0DJD9 388 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 CD81P60033 236 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 MRPS11P82912 194 aaKnown RBP9.24□□□□□ -0.93
PCDH9-204ENST00000544246 DHRS2Q13268 280 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 ALKAL1Q6UXT8 129 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 FAM219AQ8IW50 185 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 SHISA4Q96DD7 197 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 CHRNA10Q9GZZ6 450 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 VAX2Q9UIW0 290 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 CDC42EP3Q9UKI2 254 aa9.24□□□□□ -0.93
PCDH9-204ENST00000544246 BAZ2AQ9UIF9 1905 aaKnown RBP9.23□□□□□ -0.93
PCDH9-204ENST00000544246 TRAV17A0A0B4J275 112 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 A0A1W2PRD5 423 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 A0A1W2PRF3 423 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 A0A1W2PRM7 423 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 LINC01553A4QN01 128 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 ZNF137PP52743 207 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 RNFT1Q5M7Z0 435 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 WIPI1Q5MNZ9 446 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-204ENST00000544246 C9orf50Q5SZB4 431 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 WDFY1Q8IWB7 410 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 OR4X1Q8NH49 305 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 NT5CQ8TCD5 201 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 TRAV38-1A0A0B4J264 116 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 WDR25Q64LD2 544 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-204ENST00000544246 ANKRD34AQ69YU3 496 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 NUDT8Q8WV74 236 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 SGK494Q96LW2 274 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 MTCH2Q9Y6C9 303 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 SNURFLB1AK76 121 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 DIRC3C9JPN6 131 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 EPPINO95925 133 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 STAG3L3P0CL85 134 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 SMIM6P0DI80 62 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 SLC25A1P53007 311 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 CALHM1Q8IU99 346 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 SIRT7Q9NRC8 400 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 PAM16Q9Y3D7 125 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 ANKRD36CQ5JPF3 1778 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 SBK3P0C264 359 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 ROM1Q03395 351 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 AESQ08117 197 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 SIGIRRQ6IA17 410 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 RIMKLAQ8IXN7 391 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 BVESQ8NE79 360 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 PATE1Q8WXA2 126 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 ZNF707Q96C28 371 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-204ENST00000544246 ARRDC1-AS1Q9H2J1 176 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 TMEM38BQ9NVV0 291 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 PDCD6O75340 191 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 KCNMB1Q16558 191 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 PAQR9Q6ZVX9 377 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 ERASQ7Z444 233 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 OR8I2Q8N0Y5 310 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 NUDT10Q8NFP7 164 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 NUDT11Q96G61 164 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 CYSLTR2Q9NS75 346 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 SLC25A37Q9NYZ2 338 aa9.23□□□□□ -0.93
PCDH9-204ENST00000544246 C3orf80F5H4A9 247 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 CDX4O14627 284 aaPredicted RBP9.22□□□□□ -0.93
PCDH9-204ENST00000544246 GEMIN2O14893 280 aaKnown RBP9.22□□□□□ -0.93
PCDH9-204ENST00000544246 CXorf1O96002 111 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 COL19A1Q14993 1142 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 WDR38Q5JTN6 314 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 LRRC75AQ8NAA5 344 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 TIMP4Q99727 224 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 CNTD2Q9H8S5 307 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 LGALS3P17931 250 aaKnown RBP9.22□□□□□ -0.93
PCDH9-204ENST00000544246 BTF3P20290 206 aaKnown RBP9.22□□□□□ -0.93
PCDH9-204ENST00000544246 CCL7P80098 99 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 FAM53BQ14153 422 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 ASCL5Q7RTU5 278 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 TAF1P21675 1872 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 ARG1P05089 322 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 NAT1P18440 290 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 TMEM33P57088 247 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 C11orf91Q3C1V1 193 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 FAM53AQ6NSI3 398 aaPredicted RBP9.22□□□□□ -0.93
PCDH9-204ENST00000544246 ZNF774Q6NX45 483 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 LINC00469Q8N7U9 141 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 MEGF10Q96KG7 1140 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 SYT11Q9BT88 431 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 NAV1Q8NEY1 1877 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 CASP8AP2Q9UKL3 1982 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 IGLV3-10A0A075B6K4 115 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 MEX3AA1L020 520 aaKnown RBP9.22□□□□□ -0.93
PCDH9-204ENST00000544246 ZNF815PA8K554 130 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 RTP5Q14D33 572 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 PRNTQ86SH4 94 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 STXBP6Q8NFX7 210 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 NEURL2Q9BR09 285 aa9.22□□□□□ -0.93
PCDH9-204ENST00000544246 DDX60Q8IY21 1712 aaKnown RBP9.22□□□□□ -0.93
PCDH9-204ENST00000544246 TMSB15BA0A087X1C1 80 aa9.21□□□□□ -0.93
PCDH9-204ENST00000544246 MAS1LP35410 378 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms