RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 MPV17LQ2QL34 196 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 C2orf76Q3KRA6 126 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 DCAF12L2Q5VW00 463 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 DMRTA1Q5VZB9 504 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 FAHD2BQ6P2I3 314 aaPredicted RBP11.27□□□□□ -0.61
SP140-213ENST00000543928 GDPD3Q7L5L3 318 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 OR2W3Q7Z3T1 314 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 CLVS1Q8IUQ0 354 aaPredicted RBP11.27□□□□□ -0.61
SP140-213ENST00000543928 OR4S1Q8NGB4 309 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 OR4M2Q8NGB6 313 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 OR5D13Q8NGL4 314 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 PPP1R35Q8TAP8 253 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 DACT3Q96B18 629 aaPredicted RBP11.27□□□□□ -0.61
SP140-213ENST00000543928 FAHD2AQ96GK7 314 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 Q96M66 194 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 DCTN5Q9BTE1 182 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 TMEM59Q9BXS4 323 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 PPA2Q9H2U2 334 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 LIN7BQ9HAP6 207 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 DAPK2Q9UIK4 370 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 INSIG2Q9Y5U4 225 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 KIR2DS1A0A191URI9 304 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 TMEM272A0A1B0GTI8 110 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 HSPB6O14558 160 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 LDLRAD4O15165 306 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 IL1AP01583 271 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 GATA3P23771 443 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 EDDM3AQ14507 147 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 PAN3Q58A45 887 aaKnown RBP11.26□□□□□ -0.61
SP140-213ENST00000543928 ATAD3CQ5T2N8 411 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 BTNL3Q6UXE8 466 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 SUMF2Q8NBJ7 301 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 OR4M1Q8NGD0 313 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 IFT22Q9H7X7 185 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 C19orf12Q9NSK7 152 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 FBLN5Q9UBX5 448 aa11.26□□□□□ -0.61
SP140-213ENST00000543928 ANK3Q12955 4377 aaKnown RBP11.26□□□□□ -0.61
SP140-213ENST00000543928 TRBV23-1A0A0A0MS06 115 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 A0A1W2PQ09 198 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A10PA6NDY2 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A18PA6NE21 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A16PA6NEW6 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A20PA6NIJ5 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A8PA6NJQ4 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A7PA6NKC0 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A22PA8MWA6 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A12PA8MX19 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A5PA8MXJ8 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A23PA8MXZ1 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 MGST3O14880 152 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 LIPFP07098 398 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A15PP0C7V4 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A13PP0C7W8 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A14PP0C7W9 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM90A24PP0C7X0 464 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 PPIAL4GP0DN37 164 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 EDDM3BP56851 147 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 RPL31P62899 125 aaKnown RBP11.25□□□□□ -0.61
SP140-213ENST00000543928 PLA2G7Q13093 441 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 ATXN7L3Q14CW9 347 aaPredicted RBP11.25□□□□□ -0.61
SP140-213ENST00000543928 CR1LQ2VPA4 569 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 IDNKQ5T6J7 187 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 FAM185AQ8N0U4 392 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 BPIFB2Q8N4F0 458 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 TPRX1Q8N7U7 411 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 LY6G5BQ8NDX9 201 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 C8orf46Q8TAG6 207 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 NICN1Q9BSH3 213 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 URM1Q9BTM9 101 aaKnown RBP11.25□□□□□ -0.61
SP140-213ENST00000543928 DPCDQ9BVM2 203 aaPredicted RBP11.25□□□□□ -0.61
SP140-213ENST00000543928 TM2D1Q9BX74 207 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 LPAR5Q9H1C0 372 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 C7orf69Q9H7B7 122 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 ING3Q9NXR8 418 aa11.25□□□□□ -0.61
SP140-213ENST00000543928 A0A0A6YYD4 124 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 J3QLI3 93 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 CSN2P05814 226 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 SNRPBP14678 240 aaKnown RBP11.24□□□□□ -0.61
SP140-213ENST00000543928 EFNB2P52799 333 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 TMBIM6P55061 237 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 PAX8Q06710 450 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 AESQ08117 197 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 SIGIRRQ6IA17 410 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 RAB12Q6IQ22 244 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 BRICD5Q6PL45 260 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 USP43Q70EL4 1123 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 CROCCP3Q8IVE0 287 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 NDNFQ8TB73 568 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 RAB2BQ8WUD1 216 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 SLC25A46Q96AG3 418 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 COQ2Q96H96 371 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 POM121Q96HA1 1249 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 TMPRSS13Q9BYE2 586 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 DCSTAMPQ9H295 470 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 SPACA1Q9HBV2 294 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 RCC2Q9P258 522 aaKnown RBP11.24□□□□□ -0.61
SP140-213ENST00000543928 RAB22AQ9UL26 194 aa11.24□□□□□ -0.61
SP140-213ENST00000543928 MEX3AA1L020 520 aaKnown RBP11.23□□□□□ -0.61
SP140-213ENST00000543928 FUOMA2VDF0 154 aa11.23□□□□□ -0.61
SP140-213ENST00000543928 H3BUI4 141 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms