RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 OR6C3Q9NZP0 311 aa4.35□□□□□ -1.71
LMO3-229ENST00000543721 IL17BQ9UHF5 180 aa4.35□□□□□ -1.71
LMO3-229ENST00000543721 NXT1Q9UKK6 140 aaKnown RBP4.35□□□□□ -1.71
LMO3-229ENST00000543721 A0A1W2PNV4 684 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 A0A1W2PP11 408 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 ZFP92A6NM28 416 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 CEBPZOSA8MTT3 80 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 ITGB1BP1O14713 200 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 TSPAN2O60636 221 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 DHRS3O75911 302 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 KLF8O95600 359 aaPredicted RBP4.34□□□□□ -1.71
LMO3-229ENST00000543721 EML2O95834 649 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 CLPSP04118 112 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 CD99P14209 185 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 RPL29P47914 159 aaKnown RBP4.34□□□□□ -1.71
LMO3-229ENST00000543721 NPBWR2P48146 333 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 PSMB3P49720 205 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 UBE2NP61088 152 aaKnown RBP4.34□□□□□ -1.71
LMO3-229ENST00000543721 YPEL5P62699 121 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 FMODQ06828 376 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 ZNF880Q6PDB4 577 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 C1orf122Q6ZSJ8 110 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 Q6ZSR3 168 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 TMEM123Q8N131 208 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 OR5L1Q8NGL2 311 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 FAM131CQ96AQ9 280 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 MS4A10Q96PG2 267 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 ABHD14AQ9BUJ0 271 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 PARD6AQ9NPB6 346 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 RNF186Q9NXI6 227 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 MCTS1Q9ULC4 181 aaKnown RBP4.34□□□□□ -1.71
LMO3-229ENST00000543721 ZFP30Q9Y2G7 519 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 B3GALT1Q9Y5Z6 326 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 FREM3P0C091 2139 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 MED19A0JLT2 244 aaPredicted RBP4.34□□□□□ -1.71
LMO3-229ENST00000543721 NKX2-6A6NCS4 301 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 SLC31A1O15431 190 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 HPRT1P00492 218 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 AADACP22760 399 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 TUBG1P23258 451 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 CD82P27701 267 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 BIDP55957 195 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 TPPP2P59282 170 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 FXYD4P59646 89 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 HBG1P69891 147 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 HBG2P69892 147 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 MRPS11P82912 194 aaKnown RBP4.34□□□□□ -1.71
LMO3-229ENST00000543721 ENDOGQ14249 297 aaKnown RBP4.34□□□□□ -1.71
LMO3-229ENST00000543721 CNN3Q15417 329 aaKnown RBP4.34□□□□□ -1.71
LMO3-229ENST00000543721 EXT1Q16394 746 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 PHLDA2Q53GA4 152 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 WDR25Q64LD2 544 aaPredicted RBP4.34□□□□□ -1.71
LMO3-229ENST00000543721 TMEM211Q6ICI0 200 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 FAM57BQ71RH2 274 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 C6orf201Q7Z4U5 140 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 SPRED2Q7Z698 418 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 RTN4RL2Q86UN3 420 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 PRR18Q8N4B5 295 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 OR10S1Q8NGN2 331 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 NEK7Q8TDX7 302 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 ADIPOR1Q96A54 375 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 MMABQ96EY8 250 aaPredicted RBP4.34□□□□□ -1.71
LMO3-229ENST00000543721 ZNF845Q96IR2 970 aaPredicted RBP4.34□□□□□ -1.71
LMO3-229ENST00000543721 CHODLQ9H9P2 273 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 RRAGCQ9HB90 399 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 PNO1Q9NRX1 252 aaKnown RBP4.34□□□□□ -1.71
LMO3-229ENST00000543721 STARD5Q9NSY2 213 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 CLDN16Q9Y5I7 305 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 TMEM131Q92545 1883 aa4.34□□□□□ -1.71
LMO3-229ENST00000543721 IGKV1-9A0A0C4DH69 117 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 LRP5LA4QPB2 252 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 ANKUB1A6NFN9 424 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 VSTM2BA6NLU5 285 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 PROB1E7EW31 1015 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 SSSCA1O60232 199 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 TNFP01375 233 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 OMGP23515 440 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 ZFP36L1Q07352 338 aaKnown RBP4.34□□□□□ -1.72
LMO3-229ENST00000543721 MESP2Q0VG99 397 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 SRSF7Q16629 238 aaKnown RBP eCLIP4.34□□□□□ -1.72
LMO3-229ENST00000543721 C21orf62-AS1Q17RA5 79 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 ARSJQ5FYB0 599 aaPredicted RBP4.34□□□□□ -1.72
LMO3-229ENST00000543721 RIPPLY2Q5TAB7 128 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 CYB5R2Q6BCY4 276 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 TEX38Q6PEX7 206 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 MEX3BQ6ZN04 569 aaKnown RBP4.34□□□□□ -1.72
LMO3-229ENST00000543721 UEVLDQ8IX04 471 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 OR5D18Q8NGL1 313 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 ZCCHC14Q8WYQ9 949 aaKnown RBP4.34□□□□□ -1.72
LMO3-229ENST00000543721 MRGPRX4Q96LA9 322 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 LRRC3BQ96PB8 259 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 MAGT1Q9H0U3 335 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 WNT5BQ9H1J7 359 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 MANBALQ9NQG1 85 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 SERINC1Q9NRX5 453 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 COPS7AQ9UBW8 275 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 TIMM9Q9Y5J7 89 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 HCFC2Q9Y5Z7 792 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 LHFPL6Q9Y693 200 aa4.34□□□□□ -1.72
LMO3-229ENST00000543721 CPAMD8Q8IZJ3 1885 aa4.34□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms