RNA–Protein interactions for RNA: ENST00000543354.5

RPS6KC1-206, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 1 (best) BASIC

Gene RPS6KC1, Length 4,082 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-206ENST00000543354 RIMS4Q9H426 269 aaPredicted RBP12.17□□□□□ -0.46
RPS6KC1-206ENST00000543354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.17□□□□□ -0.462e-6■■■■□ 23.8
RPS6KC1-206ENST00000543354 IGHV1OR21-1A0A087WYE8 117 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 KIAA1324LA8MWY0 1029 aaPredicted RBP12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 H0YL77 283 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 SH2D1BO14796 132 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 CLN5O75503 358 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 ACTL6AO96019 429 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 OR5G3P0C626 314 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 ASAH2BP0C7U1 165 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 CD46P15529 392 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 GPR12P47775 334 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 ACOT6Q3I5F7 207 aaPredicted RBP12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 ANKRD55Q3KP44 614 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 MARVELD3Q96A59 401 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 TRBV5-5A0A0J9YX44 114 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 LILRA5A6NI73 299 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 CCR5P51681 352 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 EXT1Q16394 746 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 H1FXQ92522 213 aaKnown RBP12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 CLDN23Q96B33 292 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 NTNG2Q96CW9 530 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 RTL8AQ9BWD3 113 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 LPAR5Q9H1C0 372 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 RCC2Q9P258 522 aaKnown RBP12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 IGHV3-43A0A0B4J1X8 118 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 HSBP1O75506 76 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 PPYP01298 95 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 OPN1MWP04001 364 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 OPN1MW2P0DN77 364 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 OPN1MW3P0DN78 364 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 IGHV3-43DP0DP04 118 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 FKBP2P26885 142 aaKnown RBP12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 PPP1CCP36873 323 aaKnown RBP12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 P2RY4P51582 365 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 GGTLC2Q14390 218 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 OR8B8Q15620 311 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 HFEQ30201 348 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 ZNF260Q3ZCT1 412 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 GPR87Q9BY21 358 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 FUT9Q9Y231 359 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 CEACAM6P40199 344 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 UBE2V2Q15819 145 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 IQCJQ1A5X6 159 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 OR13G1Q8NGZ3 307 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 MENTQ9BUN1 341 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 SIT1Q9Y3P8 196 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 ARL2-SNX15V9GYD0 113 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 COL6A6A6NMZ7 2263 aa12.16□□□□□ -0.46
RPS6KC1-206ENST00000543354 C20orf202A1L168 122 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 OR2M5A3KFT3 312 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 LIPT2A6NK58 231 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 ADAM11O75078 769 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 CBR3O75828 277 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 NDUFB7P17568 137 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 TBC1D28Q2M2D7 210 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 UNQ9370/PRO34162Q6UXP9 181 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 RABEPKQ7Z6M1 372 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 C9orf40Q8IXQ3 194 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 GDF15Q99988 308 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 SLC26A1Q9H2B4 701 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 PARP11Q9NR21 331 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 POLDIP2Q9Y2S7 368 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 LRP5LA4QPB2 252 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 TOX4O94842 621 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 SUMO3P55854 103 aaPredicted RBP12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 SUMO1P63165 101 aaKnown RBP12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 NSUN5P2Q63ZY6 315 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 GUSBP11Q6P575 273 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 VAMP8Q9BV40 100 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 NAT8BQ9UHF3 227 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 SBF1O95248 1867 aa12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 NYNRINQ9P2P1 1898 aaKnown RBP12.15□□□□□ -0.46
RPS6KC1-206ENST00000543354 MPTX1A8MV57 137 aa12.15□□□□□ -0.47
RPS6KC1-206ENST00000543354 TCAPO15273 167 aa12.15□□□□□ -0.47
RPS6KC1-206ENST00000543354 PIAS2O75928 621 aa12.15□□□□□ -0.47
RPS6KC1-206ENST00000543354 ALKBH6Q3KRA9 238 aa12.15□□□□□ -0.47
RPS6KC1-206ENST00000543354 SLC7A10Q9NS82 523 aa12.15□□□□□ -0.47
RPS6KC1-206ENST00000543354 GPR132Q9UNW8 380 aa12.15□□□□□ -0.47
RPS6KC1-206ENST00000543354 BPTFQ12830 3046 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 ERGP11308 486 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 TCL1AP56279 114 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 SLC10A1Q14973 349 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 MUCL1Q96DR8 90 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 SOX7Q9BT81 388 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 AICDAQ9GZX7 198 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 MTCH2Q9Y6C9 303 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 A8MXK9 166 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 TNFSF14O43557 240 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 CST2P09228 141 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 PAX6P26367 422 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 CALCRP30988 508 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 RPS11P62280 158 aaKnown RBP eCLIP12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 SCCPDHQ8NBX0 429 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 CCDC74BQ96LY2 380 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 SLC35D1Q9NTN3 355 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 IL17BQ9UHF5 180 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 FANCMQ8IYD8 2048 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 OR5H1A6NKK0 313 aa12.14□□□□□ -0.47
RPS6KC1-206ENST00000543354 FBP1P09467 338 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms