RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 ATXN7L3Q14CW9 347 aaPredicted RBP17.24■□□□□ 0.35
OTUB1-211ENST00000543004 PAN3Q58A45 887 aaKnown RBP17.24■□□□□ 0.35
OTUB1-211ENST00000543004 LRRC10Q5BKY1 277 aa17.24■□□□□ 0.35
OTUB1-211ENST00000543004 NKAPLQ5M9Q1 402 aa17.24■□□□□ 0.35
OTUB1-211ENST00000543004 LINC00596Q86U02 117 aa17.24■□□□□ 0.35
OTUB1-211ENST00000543004 FAM89BQ8N5H3 189 aa17.24■□□□□ 0.35
OTUB1-211ENST00000543004 TPRX1Q8N7U7 411 aa17.24■□□□□ 0.35
OTUB1-211ENST00000543004 SNX22Q96L94 193 aa17.24■□□□□ 0.35
OTUB1-211ENST00000543004 URM1Q9BTM9 101 aaKnown RBP17.24■□□□□ 0.35
OTUB1-211ENST00000543004 IFT22Q9H7X7 185 aa17.24■□□□□ 0.35
OTUB1-211ENST00000543004 WNK2Q9Y3S1 2297 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 FOXI3A8MTJ6 420 aaPredicted RBP17.23■□□□□ 0.35
OTUB1-211ENST00000543004 HEXAP06865 529 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 BLVRBP30043 206 aaPredicted RBP17.23■□□□□ 0.35
OTUB1-211ENST00000543004 TMEM50BP56557 158 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 EDDM3AQ14507 147 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 GRK1Q15835 563 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 RAB12Q6IQ22 244 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 C6orf201Q7Z4U5 140 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 OR8H2Q8N162 312 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 SAMD12Q8N8I0 201 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 OR4M1Q8NGD0 313 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 DYRK2Q92630 601 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 MSI2Q96DH6 328 aaKnown RBP17.23■□□□□ 0.35
OTUB1-211ENST00000543004 DPCDQ9BVM2 203 aaPredicted RBP17.23■□□□□ 0.35
OTUB1-211ENST00000543004 SLIRPQ9GZT3 109 aaKnown RBP17.23■□□□□ 0.35
OTUB1-211ENST00000543004 ATG5Q9H1Y0 275 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 RHBDL2Q9NX52 303 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 RCC2Q9P258 522 aaKnown RBP17.23■□□□□ 0.35
OTUB1-211ENST00000543004 PEX16Q9Y5Y5 336 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 ETV7Q9Y603 341 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 KIAA2026Q5HYC2 2103 aa17.23■□□□□ 0.35
OTUB1-211ENST00000543004 CSPG4Q6UVK1 2322 aa17.22■□□□□ 0.35
OTUB1-211ENST00000543004 C22orf46C9J442 243 aa17.22■□□□□ 0.35
OTUB1-211ENST00000543004 SOX6P35712 828 aa17.22■□□□□ 0.35
OTUB1-211ENST00000543004 AESQ08117 197 aa17.22■□□□□ 0.35
OTUB1-211ENST00000543004 BTN2A1Q7KYR7 527 aa17.22■□□□□ 0.35
OTUB1-211ENST00000543004 DTX3Q8N9I9 347 aa17.22■□□□□ 0.35
OTUB1-211ENST00000543004 CHST4Q8NCG5 386 aa17.22■□□□□ 0.35
OTUB1-211ENST00000543004 PLPPR1Q8TBJ4 325 aa17.22■□□□□ 0.35
OTUB1-211ENST00000543004 H1FXQ92522 213 aaKnown RBP17.22■□□□□ 0.35
OTUB1-211ENST00000543004 PTX4Q96A99 478 aa17.22■□□□□ 0.35
OTUB1-211ENST00000543004 KCTD12Q96CX2 325 aaKnown RBP17.22■□□□□ 0.35
OTUB1-211ENST00000543004 MMP26Q9NRE1 261 aa17.22■□□□□ 0.35
OTUB1-211ENST00000543004 CCDC59Q9P031 241 aaKnown RBP17.22■□□□□ 0.35
OTUB1-211ENST00000543004 TLN2Q9Y4G6 2542 aa17.22■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A10PA6NDY2 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A18PA6NE21 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A16PA6NEW6 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A20PA6NIJ5 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A8PA6NJQ4 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A7PA6NKC0 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A22PA8MWA6 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A12PA8MX19 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A5PA8MXJ8 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A23PA8MXZ1 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 RAB27BO00194 218 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A15PP0C7V4 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A13PP0C7W8 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A14PP0C7W9 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM90A24PP0C7X0 464 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 CHATP28329 748 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 PLAC9Q5JTB6 97 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 CMTM4Q8IZR5 234 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 C1orf159Q96HA4 380 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 SMR3AQ99954 134 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 SULT4A1Q9BR01 284 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 MRI1Q9BV20 369 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAM234AQ9H0X4 552 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 UBE2QL1A1L167 161 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 A8MXK9 166 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 HPGDSO60760 199 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 TMEM127O75204 238 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 PDCD6O75340 191 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FUT3P21217 361 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 RANBP1P43487 201 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 NPY4RP50391 375 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 EDDM3BP56851 147 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 SCAND1P57086 179 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 OLFML2AQ68BL7 652 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 COQ2Q96H96 371 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 ARHGAP5-AS1Q96IT6 56 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 C18orf12Q96KH6 178 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 FAAP24Q9BTP7 215 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 ZMAT3Q9HA38 289 aaKnown RBP17.21■□□□□ 0.35
OTUB1-211ENST00000543004 C19orf12Q9NSK7 152 aa17.21■□□□□ 0.35
OTUB1-211ENST00000543004 CTDSP2O14595 271 aa17.2■□□□□ 0.34
OTUB1-211ENST00000543004 EIF4EP06730 217 aaKnown RBP17.2■□□□□ 0.34
OTUB1-211ENST00000543004 GLIPR1P48060 266 aa17.2■□□□□ 0.34
OTUB1-211ENST00000543004 KRTAP1-1Q07627 177 aa17.2■□□□□ 0.34
OTUB1-211ENST00000543004 GDPD3Q7L5L3 318 aa17.2■□□□□ 0.34
OTUB1-211ENST00000543004 OR56B1Q8NGI3 324 aa17.2■□□□□ 0.34
OTUB1-211ENST00000543004 NEK7Q8TDX7 302 aa17.2■□□□□ 0.34
OTUB1-211ENST00000543004 AP3S1Q92572 193 aa17.2■□□□□ 0.34
OTUB1-211ENST00000543004 DCTN5Q9BTE1 182 aa17.2■□□□□ 0.34
OTUB1-211ENST00000543004 TMUB1Q9BVT8 246 aa17.2■□□□□ 0.34
OTUB1-211ENST00000543004 A0A075B6Q4 140 aa17.19■□□□□ 0.34
OTUB1-211ENST00000543004 LOC105371242A0A075B767 164 aa17.19■□□□□ 0.34
OTUB1-211ENST00000543004 METTL21EPA6NDL7 271 aa17.19■□□□□ 0.34
OTUB1-211ENST00000543004 B4DSR2 109 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms