RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 ZNF324BQ6AW86 544 aaPredicted RBP12.04□□□□□ -0.48
LDB3-207ENST00000542786 ACOT7LQ6ZUV0 252 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 RPRMLQ8N4K4 120 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 SNIP1Q8TAD8 396 aaKnown RBP12.04□□□□□ -0.48
LDB3-207ENST00000542786 SCARB1Q8WTV0 552 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 C2orf50Q96LR7 162 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 ADAT1Q9BUB4 502 aaKnown RBP12.04□□□□□ -0.48
LDB3-207ENST00000542786 NAA60Q9H7X0 242 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 SPACA1Q9HBV2 294 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 KIF25Q9UIL4 384 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 WASF3Q9UPY6 502 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 ESPL1Q14674 2120 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 INTS1Q8N201 2190 aaKnown RBP12.04□□□□□ -0.48
LDB3-207ENST00000542786 IGHV1-18A0A0C4DH31 117 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 A0A1B0GWJ7 208 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 OR5H1A6NKK0 313 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 BCL2L11O43521 198 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 TUSC2O75896 110 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 NMBP08949 121 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 SELEP16581 610 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 PIGPP57054 158 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 ZNF154Q13106 437 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 TMEM187Q14656 261 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 ATXN7L3Q14CW9 347 aaPredicted RBP12.04□□□□□ -0.48
LDB3-207ENST00000542786 ESCO2Q56NI9 601 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 C20orf204Q6ZNR8 217 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 BHLHA15Q7RTS1 189 aaPredicted RBP12.04□□□□□ -0.48
LDB3-207ENST00000542786 SGPP2Q8IWX5 399 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 TOMM40LQ969M1 308 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 RRNAD1Q96FB5 475 aaKnown RBP12.04□□□□□ -0.48
LDB3-207ENST00000542786 DMRTA2Q96SC8 542 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 VRK1Q99986 396 aaPredicted RBP12.04□□□□□ -0.48
LDB3-207ENST00000542786 SLC25A15Q9Y619 301 aa12.04□□□□□ -0.48
LDB3-207ENST00000542786 IGHV2OR16-5A0A0B4J2B6 119 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 C1QTNF9BB2RNN3 333 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 H0YL77 283 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 DLL1O00548 723 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 MLNRO43193 412 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 PPYP01298 95 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 ACAA1P09110 424 aaPredicted RBP12.03□□□□□ -0.48
LDB3-207ENST00000542786 SCTP09683 121 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 PGA5P0DJD9 388 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 AP2S1P53680 142 aaPredicted RBP12.03□□□□□ -0.48
LDB3-207ENST00000542786 C1orf185Q5T7R7 199 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 ZNF474Q6S9Z5 364 aaPredicted RBP12.03□□□□□ -0.48
LDB3-207ENST00000542786 ALKAL2Q6UX46 152 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 LDLRAD3Q86YD5 345 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 LRTM2Q8N967 370 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 THAP6Q8TBB0 222 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 SLC2A9Q9NRM0 540 aa12.03□□□□□ -0.48
LDB3-207ENST00000542786 PURGQ9UJV8 347 aaKnown RBP12.03□□□□□ -0.48
LDB3-207ENST00000542786 FRYQ5TBA9 3013 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 TRDCB7Z8K6 153 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 CRYABP02511 175 aaKnown RBP12.02□□□□□ -0.48
LDB3-207ENST00000542786 RLN2P04090 185 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 KITLGP21583 273 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 TUBG1P23258 451 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 RBMXP38159 391 aaKnown RBP12.02□□□□□ -0.48
LDB3-207ENST00000542786 GLP1RP43220 463 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 FXYD4P59646 89 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 PRR14LQ5THK1 2151 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 C11orf53Q8IXP5 236 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 SLC38A6Q8IZM9 456 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 GAPTQ8N292 157 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 OR11L1Q8NGX0 322 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 RTN4IP1Q8WWV3 396 aaPredicted RBP12.02□□□□□ -0.48
LDB3-207ENST00000542786 ST8SIA2Q92186 375 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 CITED4Q96RK1 184 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 RIMS4Q9H426 269 aaPredicted RBP12.02□□□□□ -0.48
LDB3-207ENST00000542786 HES4Q9HCC6 221 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 TUBG2Q9NRH3 451 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 C1orf123Q9NWV4 160 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 ATP23Q9Y6H3 246 aa12.02□□□□□ -0.48
LDB3-207ENST00000542786 TEX13DA0A0J9YY54 714 aaPredicted RBP12.02□□□□□ -0.49
LDB3-207ENST00000542786 TMEM210A6NLX4 147 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 HSPB6O14558 160 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 HOXB5P09067 269 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 RRASP10301 218 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 HOXC12P31275 282 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 UBA52P62987 128 aaKnown RBP12.02□□□□□ -0.49
LDB3-207ENST00000542786 GTF3C1Q12789 2109 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 EIF2S3LQ2VIR3 472 aaKnown RBP12.02□□□□□ -0.49
LDB3-207ENST00000542786 PRSS54Q6PEW0 395 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 PCSK4Q6UW60 755 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 Q6ZR03 302 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 OR8G5Q8NG78 346 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 MRPL24Q96A35 216 aaKnown RBP12.02□□□□□ -0.49
LDB3-207ENST00000542786 MSI2Q96DH6 328 aaKnown RBP12.02□□□□□ -0.49
LDB3-207ENST00000542786 TLNRD1Q9H1K6 362 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 OR5AC2Q9NZP5 309 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 LUZP4Q9P127 313 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 AMDHD2Q9Y303 409 aa12.02□□□□□ -0.49
LDB3-207ENST00000542786 KIR2DS1A0A191URI9 304 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 KCNAB3O43448 404 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 OR5AC1P0C628 307 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 CEACAM8P31997 349 aaPredicted RBP12.01□□□□□ -0.49
LDB3-207ENST00000542786 TIMP3P35625 211 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 KIR2DS4P43632 304 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 KIR2DS1Q14954 304 aa12.01□□□□□ -0.49
LDB3-207ENST00000542786 PHLDA2Q53GA4 152 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms