RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 CAMTA1Q9Y6Y1 1673 aa2.53□□□□□ -2
USP28-210ENST00000542033 KIAA0556O60303 1618 aa2.53□□□□□ -2
USP28-210ENST00000542033 ECM29Q5VYK3 1845 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 ASTN1O14525 1302 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 MEIKINA0A087WXM9 373 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 IGHV3-16A0A0C4DH30 117 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 KIR2DL5BA0A0G2JN68 375 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 KIR2DL5BA0A0G2JPC4 375 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 TEX48A0A1B0GUV7 120 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 A0A1W2PP18 115 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 IGSF23A1L1A6 192 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 OR6C6A6NF89 314 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 SRRM5B3KS81 715 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 PPP5D1E7EU14 171 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CORTO00230 105 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 PPP1R2P9O14990 202 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CCL25O15444 150 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 NBR2O15453 112 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 PHF1O43189 567 aaPredicted RBP2.52□□□□□ -2.01
USP28-210ENST00000542033 EFNA2O43921 213 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 PDE6DO43924 150 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 TIMM8AO60220 97 aaPredicted RBP2.52□□□□□ -2.01
USP28-210ENST00000542033 UPK3AO75631 287 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 ADAP1O75689 374 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 TMEM50AO95807 157 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CRYGBP07316 175 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 ADRA2AP08913 450 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CST2P09228 141 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 WNT2P09544 360 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 SMIM17P0DL12 118 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CD37P11049 281 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 TDGF1P13385 188 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 MMP11P24347 488 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CXCR1P25024 350 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 FASP25445 335 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CMPK1P30085 196 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 RBM34P42696 430 aaKnown RBP2.52□□□□□ -2.01
USP28-210ENST00000542033 P2RY1P47900 373 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 GSK3BP49841 420 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 KLK7P49862 253 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CSRP3P50461 194 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 EFNB2P52799 333 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CRISP1P54107 249 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 UCNP55089 124 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 ATP5J2P56134 94 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CTBP2P56545 445 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 PIGPP57054 158 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 TPI1P60174 286 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CKS1BP61024 79 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 RND3P61587 244 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 RHOGP84095 191 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 PAX5Q02548 391 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 PAX2Q02962 417 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 BAXQ07812 192 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 RAB40BQ12829 278 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 HERPUD1Q15011 391 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 ACSM3Q53FZ2 586 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CARD16Q5EG05 197 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 VWA2Q5GFL6 755 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 MS4A13Q5J8X5 152 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 ZNF506Q5JVG8 444 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 TMEM69Q5SWH9 247 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 C1orf194Q5T5A4 169 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 LCE3CQ5T5A8 94 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 IDNKQ5T6J7 187 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 FAM219BQ5XKK7 198 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 SLC22A10Q63ZE4 541 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 SLC8B1Q6J4K2 584 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 REG3GQ6UW15 175 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 MBOAT2Q6ZWT7 520 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 H2BFWTQ7Z2G1 175 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 BOD1L2Q8IYS8 172 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 KIR2DL5AQ8N109 375 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 ZNF664Q8N3J9 261 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 C11orf42Q8N5U0 333 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 ZNF491Q8N8L2 437 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 PRELID2Q8N945 189 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 SUMF1Q8NBK3 374 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 ZNF738Q8NE65 137 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 ZNF555Q8NEP9 628 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 SLC30A7Q8NEW0 376 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 OR10G3Q8NGC4 313 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 OR4P4Q8NGL7 312 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 OR10X1Q8NGY0 326 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 OR5W2Q8NH69 310 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 RFESDQ8TAC1 157 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 FAM151AQ8WW52 585 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CRYGNQ8WXF5 182 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 UCN3Q969E3 161 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 HIST1H2BAQ96A08 127 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 MRAP2Q96G30 205 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 CENPNQ96H22 339 aaPredicted RBP2.52□□□□□ -2.01
USP28-210ENST00000542033 REEP6Q96HR9 211 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 PYURFQ96I23 114 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 ITCHQ96J02 903 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 SLC35E1Q96K37 410 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 C9orf85Q96MD7 179 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 TP53RKQ96S44 253 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 COPS8Q99627 209 aa2.52□□□□□ -2.01
USP28-210ENST00000542033 MS4A8Q9BY19 250 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms