RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 ABCA12Q86UK0 2595 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 MED13Q9UHV7 2174 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 TMEM150BA6NC51 233 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 ANKRD63C9JTQ0 380 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 H0YJX3 145 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 H7C1H1 209 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 PGRMC1O00264 195 aaKnown RBP2.96□□□□□ -1.94
SNHG1-217ENST00000541578 B4GALT5O43286 388 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 DENRO43583 198 aaKnown RBP2.96□□□□□ -1.94
SNHG1-217ENST00000541578 SNAP29O95721 258 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 DHFRP00374 187 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 PTHP01270 115 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 IGLV1-47P01700 117 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 APOC1P02654 83 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 IFNA16P05015 189 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 TFPTP0C1Z6 253 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 FAM228BP0C875 321 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 DNAH10OSP0CZ25 163 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 BGNP21810 368 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 PFN2P35080 140 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 PCK1P35558 622 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 TALDO1P37837 337 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 RBM34P42696 430 aaKnown RBP2.96□□□□□ -1.94
SNHG1-217ENST00000541578 AP2S1P53680 142 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-217ENST00000541578 RPS23P62266 143 aaKnown RBP2.96□□□□□ -1.94
SNHG1-217ENST00000541578 ARG2P78540 354 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 ELF3P78545 371 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-217ENST00000541578 C2orf54Q08AI8 447 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 ST3GAL4Q11206 333 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 ERCC8Q13216 396 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 PMS2P3Q13401 168 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 NAB1Q13506 487 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 PSG5Q15238 335 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 RGNQ15493 299 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 POU2AF1Q16633 256 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 HES3Q5TGS1 186 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 KRTAP5-4Q6L8H1 288 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 NIPAL1Q6NVV3 410 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 C3orf33Q6P1S2 294 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 CD300LGQ6UXG3 332 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 COX15Q7KZN9 410 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 NDUFAF7Q7L592 441 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 SSX6Q7RTT6 188 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 SLC30A8Q8IWU4 369 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 SLC34A3Q8N130 599 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 TMEM86AQ8N2M4 240 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 OR6K2Q8NGY2 324 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 OR8D1Q8WZ84 308 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 TM4SF18Q96CE8 201 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 SEH1LQ96EE3 360 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 SGTBQ96EQ0 304 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 PHYHIPLQ96FC7 376 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 BTN2A3PQ96KV6 586 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 ZNF317Q96PQ6 595 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-217ENST00000541578 ACBD6Q9BR61 282 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 CHID1Q9BWS9 393 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 MAP1LC3CQ9BXW4 147 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 ULBP2Q9BZM5 246 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 REEP1Q9H902 201 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 CES1P1Q9UKY3 287 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 CCL26Q9Y258 94 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 F11RQ9Y624 299 aaKnown RBP2.96□□□□□ -1.94
SNHG1-217ENST00000541578 SCN1AP35498 2009 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 ICE1Q9Y2F5 2266 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 SPTBN1Q01082 2364 aaKnown RBP2.96□□□□□ -1.94
SNHG1-217ENST00000541578 ESPL1Q14674 2120 aa2.96□□□□□ -1.94
SNHG1-217ENST00000541578 UTP20O75691 2785 aaKnown RBP2.95□□□□□ -1.94
SNHG1-217ENST00000541578 C2CD3Q4AC94 2353 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 BOD1L1Q8NFC6 3051 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 NOTCH2Q04721 2471 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 UNC13CQ8NB66 2214 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 CELSR2Q9HCU4 2923 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 ZNF233A6NK53 670 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 ZNF98A6NK75 572 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 ATP6V1G2-DDX39BF2Z307 99 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 H7C417 338 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 SLC16A7O60669 478 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 DEXIO95424 95 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 NSA2O95478 260 aaKnown RBP2.95□□□□□ -1.94
SNHG1-217ENST00000541578 IGLV3-19P01714 112 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 CALB1P05937 261 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 GP1BAP07359 652 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 HOXC4P09017 264 aaPredicted RBP2.95□□□□□ -1.94
SNHG1-217ENST00000541578 CD3GP09693 182 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 HMGA1P17096 107 aaKnown RBP2.95□□□□□ -1.94
SNHG1-217ENST00000541578 CXCL5P42830 114 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 EIF2B2P49770 351 aaKnown RBP2.95□□□□□ -1.94
SNHG1-217ENST00000541578 CDKN2DP55273 166 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 TAS2R46P59540 309 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 SPCS3P61009 180 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 VSNL1P62760 191 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 GLO1Q04760 184 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 ZBTB6Q15916 424 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 NDUFAF6Q330K2 333 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 YIF1BQ5BJH7 314 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 CPTPQ5TA50 214 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 OR2T5Q6IEZ7 315 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 ARL9Q6T311 187 aa2.95□□□□□ -1.94
SNHG1-217ENST00000541578 PLET1Q6UQ28 207 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms