RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 CST11Q9H112 138 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 MMP26Q9NRE1 261 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 IL36GQ9NZH8 169 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 MRPS7Q9Y2R9 242 aaKnown RBP10.78□□□□□ -0.68
CCDC42-202ENST00000539522 TEP1Q99973 2627 aaKnown RBP10.78□□□□□ -0.68
CCDC42-202ENST00000539522 ABCA1O95477 2261 aa10.78□□□□□ -0.68
CCDC42-202ENST00000539522 A0A0G2JMP0 313 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 A0A0X1KG70 313 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 C22orf46C9J442 243 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 DVL1O14640 695 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 CTDSPLO15194 276 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 SIGLEC5O15389 551 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 ADAM20O43506 726 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 PSPNO60542 156 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 UPK1BO75841 260 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 KNG1P01042 644 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 FOSL1P15407 271 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 RPS2P15880 293 aaKnown RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 ZNF16P17020 682 aaPredicted RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 PRKACAP17612 351 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 CDK2P24941 298 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 PRDX2P32119 198 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 EFNB2P52799 333 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 SNU13P55769 128 aaKnown RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 FGF12P61328 243 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 UNC119Q13432 240 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 RSU1Q15404 277 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 PIGYQ3MUY2 71 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 WDR25Q64LD2 544 aaPredicted RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 OR10K2Q6IF99 312 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 C17orf107Q6ZR85 190 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 Q8IYB0 196 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 OR8H2Q8N162 312 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 OR4M2Q8NGB6 313 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 OR51T1Q8NGJ9 327 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 EMG1Q92979 244 aaKnown RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 FAM46BQ96A09 425 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 MRPS24Q96EL2 167 aaKnown RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 NEIL1Q96FI4 390 aaPredicted RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 ABHD1Q96SE0 405 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 SDHCQ99643 169 aaPredicted RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 NUDT16L1Q9BRJ7 211 aaKnown RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 URM1Q9BTM9 101 aaKnown RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 SHARPINQ9H0F6 387 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 ELL3Q9HB65 397 aaPredicted RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 RHOFQ9HBH0 211 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 LPAR2Q9HBW0 351 aa10.77□□□□□ -0.69
CCDC42-202ENST00000539522 POLR3KQ9Y2Y1 108 aaPredicted RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 NSD1Q96L73 2696 aaPredicted RBP10.77□□□□□ -0.69
CCDC42-202ENST00000539522 TLN2Q9Y4G6 2542 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 TMPRSS2O15393 492 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 CRTAPO75718 401 aaPredicted RBP10.76□□□□□ -0.69
CCDC42-202ENST00000539522 HLA-DQB1P01920 261 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 CSTBP04080 98 aaKnown RBP10.76□□□□□ -0.69
CCDC42-202ENST00000539522 LCN2P80188 198 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 MRPS10P82664 201 aaKnown RBP10.76□□□□□ -0.69
CCDC42-202ENST00000539522 SMIM21Q3B7S5 101 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 SLC22A6Q4U2R8 563 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 TMEM69Q5SWH9 247 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 Q8N402 240 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 FAM89BQ8N5H3 189 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 DTX3Q8N9I9 347 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 DNTTIP1Q9H147 329 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 SEBOXQ9HB31 216 aaPredicted RBP10.76□□□□□ -0.69
CCDC42-202ENST00000539522 ABCB10Q9NRK6 738 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 DNAJB11Q9UBS4 358 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 MIOXQ9UGB7 285 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 OR14J1Q9UGF5 321 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 MXRA5Q9NR99 2828 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 CSPG4Q6UVK1 2322 aa10.76□□□□□ -0.69
CCDC42-202ENST00000539522 TRAV18A0A075B6X5 111 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 A0A0A6YYD4 124 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 GSTZ1O43708 216 aaPredicted RBP10.75□□□□□ -0.69
CCDC42-202ENST00000539522 CD5LO43866 347 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 HTR3BO95264 441 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 MPIG6BO95866 241 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 HAND1O96004 215 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 AVPP01185 164 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 GTF2F2P13984 249 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 LMO1P25800 156 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 COL10A1Q03692 680 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 SCN1BQ07699 218 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 IKZF1Q13422 519 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 NHLRC3Q5JS37 347 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 HACD4Q5VWC8 232 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 SIGIRRQ6IA17 410 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 C1orf229Q6ZS94 237 aaPredicted RBP10.75□□□□□ -0.69
CCDC42-202ENST00000539522 TCF23Q7RTU1 214 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 OR56B1Q8NGI3 324 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 THAP7Q9BT49 309 aaPredicted RBP10.75□□□□□ -0.69
CCDC42-202ENST00000539522 TMEM59Q9BXS4 323 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 BANF2Q9H503 90 aa10.75□□□□□ -0.69
CCDC42-202ENST00000539522 TRAV24A0A0B4J272 114 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 FOXI3A8MTJ6 420 aaPredicted RBP10.74□□□□□ -0.69
CCDC42-202ENST00000539522 RAB27BO00194 218 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 SLC33A1O00400 549 aaPredicted RBP10.74□□□□□ -0.69
CCDC42-202ENST00000539522 GEMIN2O14893 280 aaKnown RBP10.74□□□□□ -0.69
CCDC42-202ENST00000539522 NDUFA2O43678 99 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 OR2H2O95918 312 aa10.74□□□□□ -0.69
CCDC42-202ENST00000539522 MSMBP08118 114 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms