RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 PLEKHA6Q9Y2H5 1048 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CACNG2Q9Y698 323 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 V9GYH0 126 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 DSCAMO60469 2012 aa8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 USP9YO00507 2555 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF1A-211ENST00000538363 UTP20O75691 2785 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 A0A0A6YYD4 124 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ADAM20O43506 726 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 LY6HO94772 140 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ECDO95905 644 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 LHBP01229 141 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 HLA-DQB1P01920 261 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 GLAP06280 429 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CSF1P09603 554 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 PTHLHP12272 177 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 NDUFB7P17568 137 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CHATP28329 748 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 RCVRNP35243 200 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 FAUP35544 74 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MDH2P40926 338 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 OR3A3P47888 321 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 PTH2RP49190 550 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 EDDM3BP56851 147 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TMEM33P57088 247 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 BTG1P62324 171 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MRPS11P82912 194 aaKnown RBP8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 EDDM3AQ14507 147 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNF260Q3ZCT1 412 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 AVPI1Q5T686 147 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MZT2BQ6NZ67 158 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 NLRC3Q7RTR2 1065 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNF295-AS1Q8N0V1 137 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MFSD4AQ8N468 514 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNF561Q8N587 486 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 OR52I2Q8NH67 350 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 NUDCD2Q8WVJ2 157 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 PERPQ96FX8 193 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 PSMG3-AS1Q96PY0 264 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CHST6Q9GZX3 395 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 PPA2Q9H2U2 334 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 RIMS4Q9H426 269 aaPredicted RBP8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 HES4Q9HCC6 221 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TAS2R8Q9NYW2 309 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 AK3Q9UIJ7 227 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TRAPPC2LQ9UL33 140 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 COL12A1Q99715 3063 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 HECTD1Q9ULT8 2610 aa8.95□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SLC33A1O00400 549 aaPredicted RBP8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CTDSPLO15194 276 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TMPRSS2O15393 492 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 UPK1BO75841 260 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 IFNA6P05013 189 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 AMY2BP19961 511 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 GDNFP39905 211 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 KCNJ3P48549 501 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TMEM50BP56557 158 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ARPC4P59998 168 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 IL13RA1P78552 427 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 DGCR2P98153 550 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ATXN7L3Q14CW9 347 aaPredicted RBP8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CHRFAM7AQ494W8 412 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 LRRC10Q5BKY1 277 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 PLAC9Q5JTB6 97 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 KRBOX4Q5JUW0 171 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CLEC2AQ6UVW9 174 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 DCDC5Q6ZRR9 648 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TGIF2LYQ8IUE0 185 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SPICQ8N5J4 248 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CCDC107Q8WV48 283 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SMIM4Q8WVI0 70 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 H1FXQ92522 213 aaKnown RBP8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 GCDHQ92947 438 aaPredicted RBP8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 YIPF5Q969M3 257 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SNX22Q96L94 193 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 SULT4A1Q9BR01 284 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 NARFLQ9H6Q4 476 aa8.94□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MEIKINA0A087WXM9 373 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TMEM30CPA0ZSE6 113 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MFNGO00587 321 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 MGST3O14880 152 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 GSTZ1O43708 216 aaPredicted RBP8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TFF1P04155 84 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 INHBBP09529 407 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CSF3P09919 207 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 IL7P13232 177 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 RPS2P15880 293 aaKnown RBP8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 RBMXP38159 391 aaKnown RBP8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TAS2R19P59542 299 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TSPAN5P62079 268 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 HOXA4Q00056 320 aaPredicted RBP8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 ZNF79Q15937 498 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 TEX36Q5VZQ5 186 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 OLFML2AQ68BL7 652 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 Q6P435 159 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 BIVMQ86UB2 503 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 CD177Q8N6Q3 437 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 POC5Q8NA72 575 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 OR8B3Q8NGG8 313 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 OR4K15Q8NH41 348 aa8.93□□□□□ -0.98
TNFRSF1A-211ENST00000538363 FAM168AQ92567 244 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms