RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 ARL11Q969Q4 196 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 CNTNAP3BQ96NU0 1288 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 PECRQ9BY49 303 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 UQCC1Q9NVA1 299 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 CARHSP1Q9Y2V2 147 aaKnown RBP9.25□□□□□ -0.93
CLIP1-210ENST00000538120 ZNF292O60281 2723 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 SPRY1O43609 319 aaPredicted RBP9.25□□□□□ -0.93
CLIP1-210ENST00000538120 SLC25A17O43808 307 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 ANGPTL7O43827 346 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 SNAPINO95295 136 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 IFNA6P05013 189 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 TMEM225BP0DP42 221 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 NPY4RP50391 375 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 CNN3Q15417 329 aaKnown RBP9.25□□□□□ -0.93
CLIP1-210ENST00000538120 FAM189A2Q15884 450 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 MICBQ29980 383 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 ETV3LQ6ZN32 361 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 OR51F2Q8NH61 342 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 TMEM230Q96A57 120 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 C5orf66Q9H5L9 145 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 CRIM1Q9NZV1 1036 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 ASPMQ8IZT6 3477 aa9.25□□□□□ -0.93
CLIP1-210ENST00000538120 IGKV1-12A0A0C4DH73 117 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 C5orf49A4QMS7 147 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 SS18L1O75177 396 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-210ENST00000538120 CEACAM4O75871 244 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 IGKV1D-12P01611 117 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 CSTBP04080 98 aaKnown RBP9.24□□□□□ -0.93
CLIP1-210ENST00000538120 MUC1P15941 1255 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-210ENST00000538120 BLVRBP30043 206 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-210ENST00000538120 RAB1AP62820 205 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 PDZK1IP1Q13113 114 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 RTP5Q14D33 572 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 HIKESHIQ53FT3 197 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 SPAG16Q8N0X2 631 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 OR1K1Q8NGR3 316 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 OR4K15Q8NH41 348 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 GLYATL2Q8WU03 294 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 BCL2L2Q92843 193 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-210ENST00000538120 POM121L2Q96KW2 1035 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 Q96M66 194 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 ELL3Q9HB65 397 aaPredicted RBP9.24□□□□□ -0.93
CLIP1-210ENST00000538120 GP6Q9HCN6 339 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 ZNF581Q9P0T4 197 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 DNAJC13O75165 2243 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 TRBV6-7A0A0A0MS04 114 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 ZNF816-ZNF321PA0A0X1KG74 233 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 MSTNO14793 375 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 AGPAT2O15120 278 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 OR3A2P47893 321 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 RBP2P50120 134 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 FBXW9Q5XUX1 488 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 ZNF585AQ6P3V2 769 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 HOGA1Q86XE5 327 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 PIGCQ92535 297 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 OR10C1Q96KK4 312 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 S100A13Q99584 98 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 LRFN3Q9BTN0 628 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 METTL9Q9H1A3 318 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 CLCF1Q9UBD9 225 aa9.24□□□□□ -0.93
CLIP1-210ENST00000538120 TRAV17A0A0B4J275 112 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 C9JQL5 133 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 UBE2CO00762 179 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 NGFP01138 241 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 TBPP20226 339 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 CCNOP22674 350 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 ARR3P36575 388 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 FUT6P51993 359 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 RBM39Q14498 530 aaKnown RBP9.23□□□□□ -0.93
CLIP1-210ENST00000538120 FAHD2BQ6P2I3 314 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-210ENST00000538120 CLEC18BQ6UXF7 455 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 BORCS8Q96FH0 119 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 FAHD2AQ96GK7 314 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 NRIP2Q9BQI9 281 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 NMES1Q9C002 83 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 FGF23Q9GZV9 251 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-210ENST00000538120 MMP26Q9NRE1 261 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 ZFP57Q9NU63 452 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 STARD10Q9Y365 291 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 ZNF891A8MT65 544 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-210ENST00000538120 PRSS44E7EML9 344 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 CIDEAO60543 219 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 RCC1P18754 421 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-210ENST00000538120 CPT2P23786 658 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 AKR1C3P42330 323 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 SUPT4H1P63272 117 aaKnown RBP9.23□□□□□ -0.93
CLIP1-210ENST00000538120 PJVKQ0ZLH3 352 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 ADIPOQQ15848 244 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 ANKRD55Q3KP44 614 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 AKIRIN2Q53H80 203 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 VAX1Q5SQQ9 334 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 C6orf201Q7Z4U5 140 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 GMPPAQ96IJ6 420 aaPredicted RBP9.23□□□□□ -0.93
CLIP1-210ENST00000538120 TXN2Q99757 166 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 SEC11CQ9BY50 192 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 RHOFQ9HBH0 211 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 BIN3Q9NQY0 253 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 LPAR3Q9UBY5 353 aa9.23□□□□□ -0.93
CLIP1-210ENST00000538120 ARID1AO14497 2285 aa9.22□□□□□ -0.93
CLIP1-210ENST00000538120 LOC400499M0QZD8 3231 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms