RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 F5H0A9 414 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-205ENST00000535927 SLC33A1O00400 549 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-205ENST00000535927 CTDSP2O14595 271 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 TMPRSS2O15393 492 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 ADAM20O43506 726 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 ZNF737O75373 536 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 GYPAP02724 150 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 GABRR1P24046 479 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 CHATP28329 748 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 MRPS10P82664 201 aaKnown RBP13.54□□□□□ -0.24
VAMP1-205ENST00000535927 COL10A1Q03692 680 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 Q5PR19 223 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 FAM201AQ5SY85 155 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 CD276Q5ZPR3 534 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 OR8H2Q8N162 312 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 DPCDQ9BVM2 203 aaPredicted RBP13.54□□□□□ -0.24
VAMP1-205ENST00000535927 MGAT4AQ9UM21 535 aa13.54□□□□□ -0.24
VAMP1-205ENST00000535927 IGHV3OR15-7A0A075B7D8 119 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 TRAV24A0A0B4J272 114 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 HPGDSO60760 199 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 TK1P04183 234 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 MELTFP08582 738 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 RPS2P15880 293 aaKnown RBP13.53□□□□□ -0.24
VAMP1-205ENST00000535927 ELK1P19419 428 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 USF1P22415 310 aaPredicted RBP13.53□□□□□ -0.24
VAMP1-205ENST00000535927 ETV6P41212 452 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 EFNB2P52799 333 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 TMEM50BP56557 158 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 GMFBP60983 142 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 LOXL1Q08397 574 aaPredicted RBP13.53□□□□□ -0.24
VAMP1-205ENST00000535927 PAN3Q58A45 887 aaKnown RBP13.53□□□□□ -0.24
VAMP1-205ENST00000535927 ATAD3CQ5T2N8 411 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 SIGIRRQ6IA17 410 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 SUMF2Q8NBJ7 301 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 OR5T2Q8NGG2 359 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 OR6Q1Q8NGQ2 317 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 DIRAS2Q96HU8 199 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 GAFA1Q96PS6 74 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 MAB21L2Q9Y586 359 aa13.53□□□□□ -0.24
VAMP1-205ENST00000535927 PRRC2AP48634 2157 aaKnown RBP13.53□□□□□ -0.24
VAMP1-205ENST00000535927 CSMD2Q7Z408 3487 aa13.52□□□□□ -0.24
VAMP1-205ENST00000535927 AKAP9Q99996 3911 aa13.52□□□□□ -0.24
VAMP1-205ENST00000535927 TRBV23-1A0A0A0MS06 115 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 SULT1C2O00338 296 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 HIST1H1DP16402 221 aaKnown RBP13.52□□□□□ -0.25
VAMP1-205ENST00000535927 AMY2BP19961 511 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 DUSP1P28562 367 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 TNFSF8P32971 234 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 MEF2CQ06413 473 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-205ENST00000535927 SCN1BQ07699 218 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 ESCO2Q56NI9 601 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 SPANXN2Q5MJ10 180 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 TMEM69Q5SWH9 247 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 AVPI1Q5T686 147 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 SLC35E4Q6ICL7 350 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 C17orf107Q6ZR85 190 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 ZNF554Q86TJ5 538 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 GAPTQ8N292 157 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 S100ZQ8WXG8 99 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 SEH1LQ96EE3 360 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 CCL13Q99616 98 aa13.52□□□□□ -0.25
VAMP1-205ENST00000535927 SLC25A10Q9UBX3 287 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-205ENST00000535927 POLR3KQ9Y2Y1 108 aaPredicted RBP13.52□□□□□ -0.25
VAMP1-205ENST00000535927 IGHV4-30-2A0A087WSY4 118 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 A0A0A6YYD4 124 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 TRBV6-6A0A0A6YYG2 114 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 A0A1W2PPH5 198 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 A8MXK9 166 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 SOCS1O15524 211 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 FOXH1O75593 365 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 ZNF205O95201 554 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 IGHV2-5P01817 119 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 EIF4EP06730 217 aaKnown RBP13.51□□□□□ -0.25
VAMP1-205ENST00000535927 LIPFP07098 398 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 CDK2P24941 298 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 CBX5P45973 191 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 MRPS15P82914 257 aaKnown RBP13.51□□□□□ -0.25
VAMP1-205ENST00000535927 ZNF45Q02386 682 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 GRK1Q15835 563 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 SRSF7Q16629 238 aaKnown RBP eCLIP13.51□□□□□ -0.25
VAMP1-205ENST00000535927 CDNFQ49AH0 187 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 PYHIN1Q6K0P9 492 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 TRAT1Q6PIZ9 186 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 GDPD3Q7L5L3 318 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 ASCC1Q8N9N2 400 aaKnown RBP13.51□□□□□ -0.25
VAMP1-205ENST00000535927 ST8SIA4Q92187 359 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 C1orf159Q96HA4 380 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 NICN1Q9BSH3 213 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 PECRQ9BY49 303 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 SHARPINQ9H0F6 387 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 MIXL1Q9H2W2 232 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 KCNK15Q9H427 330 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 SCPEP1Q9HB40 452 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 RAB9BQ9NP90 201 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 IL36RNQ9UBH0 155 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 EXTL2Q9UBQ6 330 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 CLN8Q9UBY8 286 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 MALRD1Q5VYJ5 2156 aa13.51□□□□□ -0.25
VAMP1-205ENST00000535927 TRAV18A0A075B6X5 111 aa13.5□□□□□ -0.25
VAMP1-205ENST00000535927 PPIAL4CA0A0B4J2A2 164 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms