RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 ZNF354AO60765 605 aaPredicted RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 LRATO95237 230 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 RENP00797 406 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 IGKV3-15P01624 115 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 ERCC1P07992 297 aaPredicted RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 HCKP08631 526 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 IGFBP1P08833 259 aaPredicted RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 OR4E1P0C645 316 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 OR8U8P0C7N1 319 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 PVRP15151 417 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 PGAM1P18669 254 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 SRMP19623 302 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 CXCL2P19875 107 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 TBXA2RP21731 343 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 GLRA1P23415 457 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 CD82P27701 267 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 PRDX3P30048 256 aaKnown RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 FMO3P31513 532 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 SLC1A2P43004 574 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 TTPAP49638 278 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 EVX1P49640 407 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 GZMMP51124 257 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 XKP51811 444 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 AKR1D1P51857 326 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 RAP1AP62834 184 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 DEFA6Q01524 100 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 CRMP1Q14194 572 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 VPS26BQ4G0F5 336 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 SPANXN3Q5MJ09 141 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 RHBDD2Q6NTF9 364 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 RPL13AP3Q6NVV1 102 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 CD200R1LQ6Q8B3 271 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 ZNF562Q6V9R5 426 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 TPRA1Q86W33 373 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 KCNMB4Q86W47 210 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 CALHM3Q86XJ0 350 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 PUSL1Q8N0Z8 303 aaKnown RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 FAM58AQ8N1B3 248 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 GABRG1Q8N1C3 465 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 GTPBP8Q8N3Z3 284 aaPredicted RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 OR4E2Q8NGC2 313 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 OR4K14Q8NGD5 310 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 OR4K15Q8NH41 348 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 OR5K2Q8NHB8 316 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 C8orf46Q8TAG6 207 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 CNIH3Q8TBE1 160 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 ZPLD1Q8TCW7 415 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 CD200R1Q8TD46 325 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 LIPHQ8WWY8 451 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 ST8SIA1Q92185 356 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 TFGQ92734 400 aaPredicted RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 RAB1CQ92928 201 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 SLC25A46Q96AG3 418 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 NABP1Q96AH0 204 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 C10orf35Q96D05 121 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 L3HYPDHQ96EM0 354 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 Q96MT0 163 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 ZNF285Q96NJ3 590 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 MS4A4EQ96PG1 132 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 TECTBQ96PL2 329 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 CMSS1Q9BQ75 279 aaKnown RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 MRPL57Q9BQC6 102 aaKnown RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 PDCD10Q9BUL8 212 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 CHRNA10Q9GZZ6 450 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 RNF167Q9H6Y7 350 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 IL1RL2Q9HB29 575 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 NMRAL1Q9HBL8 299 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 SLC25A19Q9HC21 320 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 FAM60AQ9NP50 221 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 TREM1Q9NP99 234 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 PNO1Q9NRX1 252 aaKnown RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 DEPPQ9NTK1 212 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 RASL12Q9NYN1 266 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 MED11Q9P086 117 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 SEC14L4Q9UDX3 406 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 PITPNC1Q9UKF7 332 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 HEBP2Q9Y5Z4 205 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 MRPS18BQ9Y676 258 aaKnown RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 USP9XQ93008 2570 aaPredicted RBP2.64□□□□□ -1.99
USP48-215ENST00000534705 MED12Q93074 2177 aa2.64□□□□□ -1.99
USP48-215ENST00000534705 POLEQ07864 2286 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 CRYBG3Q68DQ2 2970 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 IGKV1-8A0A0C4DH67 115 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 A0A1W2PPV4 95 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 H0YL77 283 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 TEX46H3BTG2 121 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 OR7A17O14581 309 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 IMPA2O14732 288 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 RRP8O43159 456 aaKnown RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 FGF16O43320 207 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 TPST1O60507 370 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 ICOSLGO75144 302 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 RDH16O75452 317 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 SCELO95171 688 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 C1orf105O95561 183 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 FADS2O95864 444 aaKnown RBP2.63□□□□□ -1.99
USP48-215ENST00000534705 CST1P01037 141 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 PTHP01270 115 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 PRB1P04280 392 aa2.63□□□□□ -1.99
USP48-215ENST00000534705 SERPIND1P05546 499 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms