RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 FABP4P15090 132 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 ALDH3B1P43353 468 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 ZNF84P51523 738 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 MAML2Q8IZL2 1156 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-226ENST00000533820 MAGT1Q9H0U3 335 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 C19orf25Q9UFG5 118 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-226ENST00000533820 TUBD1Q9UJT1 453 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 PTRH2Q9Y3E5 179 aaKnown RBP16.76■□□□□ 0.27
CAPN1-226ENST00000533820 HSPB6O14558 160 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 TOX3O15405 576 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-226ENST00000533820 PPP1CCP36873 323 aaKnown RBP16.76■□□□□ 0.27
CAPN1-226ENST00000533820 TMEM187Q14656 261 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 ZIC4Q8N9L1 334 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 PIGCQ92535 297 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 ST3GAL6Q9Y274 331 aa16.76■□□□□ 0.27
CAPN1-226ENST00000533820 ONECUT2O95948 504 aa16.75■□□□□ 0.27
CAPN1-226ENST00000533820 CTSSP25774 331 aa16.75■□□□□ 0.27
CAPN1-226ENST00000533820 ZNF468Q5VIY5 522 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-226ENST00000533820 TMEM123Q8N131 208 aa16.75■□□□□ 0.27
CAPN1-226ENST00000533820 A6NNC1 897 aa16.75■□□□□ 0.27
CAPN1-226ENST00000533820 E5RGE8 158 aa16.75■□□□□ 0.27
CAPN1-226ENST00000533820 ZIC3O60481 467 aa16.75■□□□□ 0.27
CAPN1-226ENST00000533820 OR7C1O76099 320 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-226ENST00000533820 SNCAP37840 140 aa16.75■□□□□ 0.27
CAPN1-226ENST00000533820 CD200P41217 278 aa16.75■□□□□ 0.27
CAPN1-226ENST00000533820 ZNF133P52736 654 aaPredicted RBP16.75■□□□□ 0.27
CAPN1-226ENST00000533820 MR1Q95460 341 aa16.75■□□□□ 0.27
CAPN1-226ENST00000533820 ZNF442Q9H7R0 627 aa16.75■□□□□ 0.27
CAPN1-226ENST00000533820 NSG2Q9Y328 171 aa16.75■□□□□ 0.27
CAPN1-226ENST00000533820 PUS1Q9Y606 427 aaKnown RBP eCLIP16.75■□□□□ 0.27
CAPN1-226ENST00000533820 UMAD1C9J7I0 102 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 ZNF32P17041 273 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 TMEM11P17152 192 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 TRA2AQ13595 282 aaKnown RBP eCLIP16.74■□□□□ 0.27
CAPN1-226ENST00000533820 TIPARPQ7Z3E1 657 aaKnown RBP16.74■□□□□ 0.27
CAPN1-226ENST00000533820 ABHD14AQ9BUJ0 271 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 MMP24Q9Y5R2 645 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 KPTNQ9Y664 436 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 BORCS7-ASMTA0A0B4J1R7 106 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 GAPDHP04406 335 aaKnown RBP16.74■□□□□ 0.27
CAPN1-226ENST00000533820 RGS19P49795 217 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 FAM3AP98173 230 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 KHDC3LQ587J8 217 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 C9orf135Q5VTT2 229 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 RARRES2Q99969 163 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 C19orf12Q9NSK7 152 aa16.74■□□□□ 0.27
CAPN1-226ENST00000533820 FAM24AA6NFZ4 105 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 CDRT15L2A8MXV6 281 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 SPIN3Q5JUX0 258 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 DMRTA1Q5VZB9 504 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 FGFBP3Q8TAT2 258 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 TMEM54Q969K7 222 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 PLEKHA2Q9HB19 425 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 TIMM10BQ9Y5J6 103 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 DIDO1Q9BTC0 2240 aaKnown RBP16.73■□□□□ 0.27
CAPN1-226ENST00000533820 DKK1O94907 266 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 NRASP01111 189 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 CCNOP22674 350 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 CHATP28329 748 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 ARL6IP1Q15041 203 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 PCOLCEQ15113 449 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 C10orf128Q5T292 105 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 TP53RKQ96S44 253 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 FAM86C1Q9NVL1 165 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 LUZP4Q9P127 313 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 ADAMTS20P59510 1910 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 A0A0G2JMM0 328 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 A0A1W2PPB8 328 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 A0A1W2PRS3 328 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 KIR3DP1A8MWS1 328 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 AADACP22760 399 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 SLC35G3Q8N808 338 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 TMEM208Q9BTX3 173 aa16.73■□□□□ 0.27
CAPN1-226ENST00000533820 PHF7Q9BWX1 381 aaPredicted RBP16.73■□□□□ 0.27
CAPN1-226ENST00000533820 COL6A3P12111 3177 aa16.72■□□□□ 0.27
CAPN1-226ENST00000533820 C3orf80F5H4A9 247 aa16.72■□□□□ 0.27
CAPN1-226ENST00000533820 SOD3P08294 240 aa16.72■□□□□ 0.27
CAPN1-226ENST00000533820 DANCRP0C864 163 aa16.72■□□□□ 0.27
CAPN1-226ENST00000533820 OTX1P32242 354 aaPredicted RBP16.72■□□□□ 0.27
CAPN1-226ENST00000533820 STARD10Q9Y365 291 aa16.72■□□□□ 0.27
CAPN1-226ENST00000533820 RRP8O43159 456 aaKnown RBP16.72■□□□□ 0.27
CAPN1-226ENST00000533820 LIFP15018 202 aa16.72■□□□□ 0.27
CAPN1-226ENST00000533820 NPBWR2P48146 333 aa16.72■□□□□ 0.27
CAPN1-226ENST00000533820 HERV-K104P61576 105 aa16.72■□□□□ 0.27
CAPN1-226ENST00000533820 PLCXD3Q63HM9 321 aa16.72■□□□□ 0.27
CAPN1-226ENST00000533820 Q6ZPA2 131 aa16.72■□□□□ 0.27
CAPN1-226ENST00000533820 LIAT1Q6ZQX7 453 aa16.72■□□□□ 0.27
CAPN1-226ENST00000533820 ATXN7O15265 892 aaPredicted RBP16.71■□□□□ 0.27
CAPN1-226ENST00000533820 ST8SIA3O43173 380 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 ZNF92Q03936 586 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 HIST2H3AQ71DI3 136 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 TMEM217Q8N7C4 229 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 ZFP62Q8NB50 900 aaPredicted RBP16.71■□□□□ 0.27
CAPN1-226ENST00000533820 PROK2Q9HC23 129 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 NSG1A0A0A6YYJ2 146 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 NKX2-6A6NCS4 301 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 A8MWP6 167 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 APLNRP35414 380 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 CCL20P78556 96 aa16.71■□□□□ 0.27
CAPN1-226ENST00000533820 OSR2Q8N2R0 312 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms