RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 ZNF729A6NN14 1252 aaPredicted RBP9.13□□□□□ -0.95
CMTM1-216ENST00000533078 B2RBV5 119 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 SEC14L6B5MCN3 397 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 AP4M1O00189 453 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 ATP8B1O43520 1251 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 LY86O95711 162 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 UBCP0CG48 685 aaKnown RBP9.13□□□□□ -0.95
CMTM1-216ENST00000533078 ZNF20P17024 532 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 CHATP28329 748 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 NPBWR2P48146 333 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 RAB7AP51149 207 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 LUMP51884 338 aaPredicted RBP9.13□□□□□ -0.95
CMTM1-216ENST00000533078 SCN1BQ07699 218 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 AESQ08117 197 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 MADCAM1Q13477 382 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 BAIAP2L2Q6UXY1 529 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 FAM220AQ7Z4H9 259 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 GID4Q8IVV7 300 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 OR8H3Q8N146 312 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 STPG2Q8N412 459 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 C5orf56Q8N8D9 126 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 CHST4Q8NCG5 386 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 HAVCR2Q8TDQ0 301 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 CCDC124Q96CT7 223 aaKnown RBP9.13□□□□□ -0.95
CMTM1-216ENST00000533078 ASB9Q96DX5 294 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 IL36RNQ9UBH0 155 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 MRM2Q9UI43 246 aaKnown RBP9.13□□□□□ -0.95
CMTM1-216ENST00000533078 ARL2BPQ9Y2Y0 163 aa9.13□□□□□ -0.95
CMTM1-216ENST00000533078 LSM4Q9Y4Z0 139 aaKnown RBP9.13□□□□□ -0.95
CMTM1-216ENST00000533078 A0A087X0M5 115 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 A0A1B0GX30 115 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 MAGEB4O15481 346 aaPredicted RBP9.12□□□□□ -0.95
CMTM1-216ENST00000533078 OR2H2O95918 312 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 IGHG2P01859 326 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 CSN2P05814 226 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 C21orf33P30042 268 aaPredicted RBP9.12□□□□□ -0.95
CMTM1-216ENST00000533078 GLIPR1P48060 266 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 CRISP1P54107 249 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 HNF4GQ14541 408 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 PNLIPRP3Q17RR3 467 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 CASC10Q5T4H9 136 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 LCNL1Q6ZST4 164 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 C18orf65Q6ZTR6 163 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 CATSPERDQ86XM0 798 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 DRAM1Q8N682 238 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 ZNF565Q8N9K5 539 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 OR10X1Q8NGY0 326 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 SPSB1Q96BD6 273 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 RAX2Q96IS3 184 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 DUX3Q96PT4 197 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 RHOFQ9HBH0 211 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 HMG20AQ9NP66 347 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 ING3Q9NXR8 418 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 LINC00527Q9UJ94 153 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 ZNF256Q9Y2P7 627 aaPredicted RBP9.12□□□□□ -0.95
CMTM1-216ENST00000533078 SMAD5-AS1Q9Y6J3 95 aa9.12□□□□□ -0.95
CMTM1-216ENST00000533078 KBTBD11-OT1A0A1B0GTJ5 212 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 LOC107986453A0A1B0GWG9 222 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 FAM90A18PA6NE21 464 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 FAM90A16PA6NEW6 464 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 FAM90A20PA6NIJ5 464 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 METTL15A6NJ78 407 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 FAM90A9PA6NNJ1 464 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 NCBP2LA6PVI3 153 aaKnown RBP9.11□□□□□ -0.95
CMTM1-216ENST00000533078 FAM90A12PA8MX19 464 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 FAM90A5PA8MXJ8 464 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 LY6LH3BQJ8 138 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 J3QR06 171 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 FAM90A15PP0C7V4 464 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 FAM90A13PP0C7W8 464 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 FAM90A14PP0C7W9 464 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 FAM90A24PP0C7X0 464 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 CALCBP10092 127 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 LYL1P12980 280 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 ATP6V1E1P36543 226 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 GLP1RP43220 463 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 INSL3P51460 131 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 PDZK1IP1Q13113 114 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 GPR50Q13585 617 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 KIR2DS1Q14954 304 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 NXNL2Q5VZ03 156 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 TMEM179BQ7Z7N9 219 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 HS3ST5Q8IZT8 346 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 OPALINQ96PE5 141 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 TBX5Q99593 518 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 DCLRE1BQ9H816 532 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 ZMAT4Q9H898 229 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 ADGRL4Q9HBW9 690 aa9.11□□□□□ -0.95
CMTM1-216ENST00000533078 CHCHD3Q9NX63 227 aaKnown RBP9.11□□□□□ -0.95
CMTM1-216ENST00000533078 AQP12BA6NM10 295 aa9.1□□□□□ -0.95
CMTM1-216ENST00000533078 DEGS1O15121 323 aa9.1□□□□□ -0.95
CMTM1-216ENST00000533078 PRKYO43930 277 aa9.1□□□□□ -0.95
CMTM1-216ENST00000533078 SULT1C4O75897 302 aa9.1□□□□□ -0.95
CMTM1-216ENST00000533078 IGKV1D-33P01593 117 aa9.1□□□□□ -0.95
CMTM1-216ENST00000533078 IGKV1-33P01594 117 aa9.1□□□□□ -0.95
CMTM1-216ENST00000533078 OR2T7P0C7T2 308 aa9.1□□□□□ -0.95
CMTM1-216ENST00000533078 PRKACGP22612 351 aa9.1□□□□□ -0.95
CMTM1-216ENST00000533078 MS4A2Q01362 244 aa9.1□□□□□ -0.95
CMTM1-216ENST00000533078 FOXE3Q13461 319 aa9.1□□□□□ -0.95
CMTM1-216ENST00000533078 ATXN7L3Q14CW9 347 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms